G76054


Basic Information

Item Value
gene id G76054
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 3138953 ~ 3139893 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU94963
CCACGAACCCatctgtttgtaaaataaacatgcaacttTATAAGCAGTTGCTTTTCCTGATTAGGGACCTCAAAACAACTAATTGactaacatcaacacaaattattcaacactgacacacatttgCTCCCTCCTCTTCATTCCGTCTCCCGCCTTACctttataaatgaagaaggcGATTGGCCGAATAAAAAATTACTGATAAGTGTCTTCTGCAAGTGATTGGCCACAAAGTttgacaagcatttcctgcaaagtgattggctgcataaaaaatgagttactcctcccacattccatgGTTTCTGGGGCTGCAgctatacatacatttgcataaaaaattaaaaaacgtGATACTTGCGATAtaagcatttttaatatatccCAAAAACTCGATATATTGACCAAACCTAATATGAAGTATCATAAATCCACCTGAACATGCATCTTTATGACACTACGTTTAATTAATATGTGTTAAACTCAGTGATTTCCTAAATGTATATAAAGAGACTAAGGATTTTGGTTTGCTGCAAAAGGAAACAGATGggtaaataaaaaatgggtGTTGAAGTTAGTGTGTGGAGGAAAACTGAGCATTAAAGTAACAAGTTGCAATACCATTTGTTTCCTGTATGatcatttttagttttgattCACCTTGTTTAAATTTATGCAGTAGAAATTGCACTTTAAACGAATGTAAACAGAaacaagcaaagaaacaaaaaatccatACAACCCTAATATTTCCATTCCTGTAAGAGAATTGGATGTTTGTTAATTATGGAAAGTTTGTCATTGTAAATTGCATGATTCATTGAGCGTGAAAGCATGGTTAATTACAAGAAAGCCATAATCAGTAACTCGGTGTAAGGCTTGTTCTGAAAGTGATGGATATTAAagactacagaaaaaaataaaccaaactgTTTCTACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94963 True 941 lncRNA 0.34 1 3138953 3139893

Neighbor

gene id symbol gene type direction distance location
AMCG00009869 NA coding upstream 2498 3129940 ~ 3136455 (+)
AMCG00009870 NA coding upstream 15903 3119111 ~ 3123050 (+)
AMCG00009868 LOC106580165,LOC108426240,LOC103032997,LOC106585857,LOC108255838,LOC105014633 coding upstream 235877 2891893 ~ 2903076 (+)
AMCG00009866 NA coding upstream 256870 2878709 ~ 2882083 (+)
AMCG00009865 NA coding upstream 286000 2848341 ~ 2852953 (+)
AMCG00009871 cetn3,LOC106563079 coding downstream 2036 3141929 ~ 3147494 (+)
AMCG00009878 NA coding downstream 342083 3481976 ~ 3482596 (+)
AMCG00009879 NA coding downstream 354476 3494369 ~ 3512331 (+)
AMCG00009880 LOC106585770 coding downstream 488996 3628889 ~ 3659237 (+)
AMCG00009881 NA coding downstream 588386 3728279 ~ 3736645 (+)
G76052 NA non-coding upstream 9250 3129165 ~ 3129703 (+)
G76050 NA non-coding upstream 10847 3127122 ~ 3128106 (+)
G75964 NA non-coding upstream 643238 2495501 ~ 2495715 (+)
G75957 NA non-coding upstream 752218 2381857 ~ 2386735 (+)
G75914 nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC106580150,LOC106585791 non-coding upstream 935731 2184379 ~ 2203222 (+)
G76077 NA non-coding downstream 280719 3420612 ~ 3420826 (+)
G76105 NA non-coding downstream 398604 3538497 ~ 3603605 (+)
G76163 NA non-coding downstream 656658 3796551 ~ 3797008 (+)
G76168 NA non-coding downstream 751268 3891161 ~ 3894819 (+)
G76186 NA non-coding downstream 1113344 4253237 ~ 4253554 (+)
AMCG00009863 NA other upstream 370445 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 1715831 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 1770138 1360536 ~ 1368815 (+)
G75807 NA other upstream 1803903 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 1811360 1322618 ~ 1327593 (+)
AMCG00009898 tmem167a other downstream 1771077 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 2092739 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 2626444 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 2919349 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 3902704 7042597 ~ 7062734 (+)

Expression


Co-expression Network