G76105


Basic Information

Item Value
gene id G76105
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 3538497 ~ 3603605 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95024
GTCCATGGCAATAGACGAACAATGGGTCTTCAGTTAATATGCAACAAAAGAATTGGGGAACTTGTTTGAATTTCAGAGCACGTCCTTCTTCACACGGAGGGATGGACTAGACCTCGACCAACCCCAAAAACTTGCAGACACTCGCCCACTACAACAGTTCACTTTTCCATTTGGTGTCGAAGACAAATACGTTAtgggaaagttttttttttttttttttttgtccatgtGGATGGAATATGTTCATGCTTAACTCAGAGCAACTGAAGCACGCATAATGGCCTCAGTATTAGCGGCAATTTTAAATGAGGGGGTGACGAGGGATGGTTGGATTTTTGGGGGAAGTCTAGAAAGAACCTTGCACACGTCCGAAAAGGTTTGTTTGCTGGATGATTTCCGACGAGAGGACTGCTCAAGAAACCCTCTGCACATTTTGATAAGCGTGTTTTCATAATTGTGAAAATACATAGTAAGAAGAGATGACCATAACTTATCTACTACAAGAGAATAGGCAAATCAACCTGTCTAAGATCCTTCCCGAAGCTACCCCAGCATGAGgaaAGAGGTCTCTGCAGGGAGAAAACAGTTGATGTCTTCATTTGAAAAGGAGGATCTAGGAGCCCTTTTGGGAGTAATGAATGTTTAAgGTGGACACCTCCAGTGACTACAGCGATGAGGATCTTGAACATTTGAGGGAAACAACTGCTATCAGTGAAGATGCCTCCCAGGAAGTAAGGATATGGTAACTAGTAGGTGCACATGTGTtgcatatgtgtgtttatttaaatcttaTCAGATAATTTAAAGAAAGTGACATATTTAATGACTGACACGCAAAGTTGTGCCTTGaaataaatgattttttaaataaa
>TU95026
GGCATGTGTGTCAGCTGTTTGTCTCAACAAACTTCTACCAAGTTTTGCAACTGGGTGAAATGTAATGGAAGTGCATTGTTATCAAAAGACAGAGTAAGAAGAGATGACCATAACTTATCTACTACAAGAGAATAGGCAAATCAACCTGTCTAAGATCCTTCCCGAAGCTACCCCAGCATGAGgaaAGAGGTCTCTGCAGGGAGAAAACAGTTGATGTCTTCATTTGAAAAGGAGGATCTAGGAGCCCTTTTGGGAGTAATGAATGTTTAAgGTGGACACCTCCAGTGACTACAGCGATGAGGATCTTGAACATTTGAGGGAAACAACTGCTATCAGTGAAGATGCCTCCCAGGAAGTAAGGATATGGTAACTAGTAGGTGCACATGTGTtgcatatgtgtgtttatttaaatcttaTCAGATAATTTAAAGAAAGTGACATATTTAATGACTGACACGCAAAGTTGTGCCTTGaaataaatgattttttaaataaa

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU95024 True 872 lncRNA 0.40 4 3538497 3603605
TU95026 False 496 lncRNA 0.39 4 3552807 3603605

Neighbor

gene id symbol gene type direction distance location
AMCG00009879 NA coding upstream 26166 3494369 ~ 3512331 (+)
AMCG00009878 NA coding upstream 55901 3481976 ~ 3482596 (+)
AMCG00009871 cetn3,LOC106563079 coding upstream 391003 3141929 ~ 3147494 (+)
AMCG00009869 NA coding upstream 402042 3129940 ~ 3136455 (+)
AMCG00009870 NA coding upstream 415447 3119111 ~ 3123050 (+)
AMCG00009880 LOC106585770 coding downstream 25284 3628889 ~ 3659237 (+)
AMCG00009881 NA coding downstream 124674 3728279 ~ 3736645 (+)
AMCG00009885 NA coding downstream 713433 4317038 ~ 4317867 (+)
AMCG00009890 NA coding downstream 743059 4346664 ~ 4471973 (+)
AMCG00009889 NA coding downstream 871687 4475292 ~ 4476458 (+)
G76077 NA non-coding upstream 117671 3420612 ~ 3420826 (+)
G76054 NA non-coding upstream 398604 3138953 ~ 3139893 (+)
G76052 NA non-coding upstream 408794 3129165 ~ 3129703 (+)
G76050 NA non-coding upstream 410391 3127122 ~ 3128106 (+)
G75964 NA non-coding upstream 1042782 2495501 ~ 2495715 (+)
G76163 NA non-coding downstream 192946 3796551 ~ 3797008 (+)
G76168 NA non-coding downstream 287556 3891161 ~ 3894819 (+)
G76186 NA non-coding downstream 649632 4253237 ~ 4253554 (+)
G76266 NA non-coding downstream 1554783 5158388 ~ 5228786 (+)
G76346 NA non-coding downstream 1858918 5462523 ~ 5462811 (+)
AMCG00009863 NA other upstream 769989 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 2115375 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 2169682 1360536 ~ 1368815 (+)
G75807 NA other upstream 2203447 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 2210904 1322618 ~ 1327593 (+)
AMCG00009898 tmem167a other downstream 1307365 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 1629027 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 2162732 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 2455637 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 3438992 7042597 ~ 7062734 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000039_01503381_01505483 NA coding CI01000039 null 1502913 ~ 1505671 (-)