G76163


Basic Information

Item Value
gene id G76163
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 3796551 ~ 3797008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95090
gactttatgccactcctggcacaaaaattcaagcagctcagctttgtttgatggcttgtgaccatccatcttcctcttgatcacattccagaggttttcaatggggttcaggtctggagattgggctggccatgacagggtcttgatctggtggtcctccatccacaccttgattgacctggctgtgtgccatggagcattgtcctgctggagaAACCAATCCTcggagttggggaacattgtcagagcagaaggaagcaagttttcttccaggacaaccttgtacgtggcttgattcatgtgtccttcacaaagacaaatctgcccgattccagccttgctgaagcacccccagatcatcaccaatcctccaccaaatttcacagcaggtgcgagacactgtggcatgttggcctctccaggtctccgtctaaccattagatgaccaggtgttgggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95090 True 458 lncRNA 0.51 1 3796551 3797008

Neighbor

gene id symbol gene type direction distance location
AMCG00009881 NA coding upstream 59906 3728279 ~ 3736645 (+)
AMCG00009880 LOC106585770 coding upstream 137314 3628889 ~ 3659237 (+)
AMCG00009879 NA coding upstream 284220 3494369 ~ 3512331 (+)
AMCG00009878 NA coding upstream 313955 3481976 ~ 3482596 (+)
AMCG00009871 cetn3,LOC106563079 coding upstream 649057 3141929 ~ 3147494 (+)
AMCG00009885 NA coding downstream 520030 4317038 ~ 4317867 (+)
AMCG00009890 NA coding downstream 549656 4346664 ~ 4471973 (+)
AMCG00009889 NA coding downstream 678284 4475292 ~ 4476458 (+)
AMCG00009891 NA coding downstream 680613 4477621 ~ 4478723 (+)
AMCG00009888 hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 coding downstream 902674 4699682 ~ 4716944 (+)
G76105 NA non-coding upstream 192946 3538497 ~ 3603605 (+)
G76077 NA non-coding upstream 375725 3420612 ~ 3420826 (+)
G76054 NA non-coding upstream 656658 3138953 ~ 3139893 (+)
G76052 NA non-coding upstream 666848 3129165 ~ 3129703 (+)
G76050 NA non-coding upstream 668445 3127122 ~ 3128106 (+)
G76168 NA non-coding downstream 94153 3891161 ~ 3894819 (+)
G76186 NA non-coding downstream 456229 4253237 ~ 4253554 (+)
G76266 NA non-coding downstream 1361380 5158388 ~ 5228786 (+)
G76346 NA non-coding downstream 1665515 5462523 ~ 5462811 (+)
G76408 NA non-coding downstream 1947249 5744257 ~ 5751212 (+)
AMCG00009863 NA other upstream 1028043 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 2373429 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 2427736 1360536 ~ 1368815 (+)
G75807 NA other upstream 2461501 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 2468958 1322618 ~ 1327593 (+)
AMCG00009898 tmem167a other downstream 1113962 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 1435624 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 1969329 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 2262234 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 3245589 7042597 ~ 7062734 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G118438 NA non-coding CI01000021 null 4853155 ~ 4882086 (+)