G76346


Basic Information

Item Value
gene id G76346
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 5462523 ~ 5462811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95334
TACTATAAAACTGGACCACTTTAATTGCAAACACCATTCATGATAAGGACCCAGTAAAACAATCTGAAaggatttgtaaaaaaaaaaaaaaaaaaaaaaaaacatgactgagCAGGTAAGTCACTCAAGAGTCTTGaaatgcaatggaaaaaaacaagggaaaaaGTCTGTCAGGTGAGAGGACTGAGGTCACAGGCAGGAAGTGGAAGTGGATAACATTCATTCTCAACACCTTCAGACCTTCAGCAATGCACACTCTTCACCTGGAACAAGTATTCCATctctaaag

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU95334 True 289 lncRNA 0.37 1 5462523 5462811

Neighbor

gene id symbol gene type direction distance location
AMCG00009905 NA coding upstream 2639 5458286 ~ 5459884 (+)
AMCG00009906 NA coding upstream 14204 5438467 ~ 5448319 (+)
AMCG00009904 si:ch211-130m23.3,LOC107589015,LOC107741681,LOC107685246,LOC107561624,LOC108426230 coding upstream 317587 5142003 ~ 5144936 (+)
AMCG00009896 NA coding upstream 449193 5011378 ~ 5013330 (+)
AMCG00009888 hapln1b,LOC107758638,LOC108425247,LOC107741669,LOC107602078,LOC107658619 coding upstream 745579 4699682 ~ 4716944 (+)
AMCG00009909 NA coding downstream 46273 5509084 ~ 5525562 (+)
AMCG00009911 NA coding downstream 100164 5562975 ~ 5594007 (+)
AMCG00009914 NA coding downstream 132627 5595438 ~ 5602983 (+)
AMCG00009916 LOC103362416,LOC106953753 coding downstream 254887 5717698 ~ 5744142 (+)
AMCG00009919 NA coding downstream 323614 5786425 ~ 5794926 (+)
G76266 NA non-coding upstream 233737 5158388 ~ 5228786 (+)
G76186 NA non-coding upstream 1208969 4253237 ~ 4253554 (+)
G76168 NA non-coding upstream 1567704 3891161 ~ 3894819 (+)
G76163 NA non-coding upstream 1665515 3796551 ~ 3797008 (+)
G76105 NA non-coding upstream 1858918 3538497 ~ 3603605 (+)
G76408 NA non-coding downstream 281446 5744257 ~ 5751212 (+)
G76417 NA non-coding downstream 307444 5770255 ~ 5771092 (+)
G76418 NA non-coding downstream 308863 5771674 ~ 5771949 (+)
G76434 NA non-coding downstream 313145 5775956 ~ 5776174 (+)
G76460 NA non-coding downstream 434499 5897310 ~ 5900982 (+)
AMCG00009897 NA other upstream 214342 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 541639 4910970 ~ 4920884 (+)
AMCG00009863 NA other upstream 2694015 2752260 ~ 2768508 (+)
AMCG00009852 NA other upstream 4039401 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 4093708 1360536 ~ 1368815 (+)
AMCG00009915 NA other downstream 303526 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 596431 6059242 ~ 6085806 (+)
AMCG00009959 NA other downstream 1579786 7042597 ~ 7062734 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 4840115 10302926 ~ 10313486 (+)
G77423 NA other downstream 5686815 11149626 ~ 11155469 (+)

Expression


Co-expression Network