Gene
RNA
| Item | Value |
|---|---|
| gene id | G76550 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 6161456 ~ 6166615 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU95570 | True | 415 | lncRNA | 0.57 | 2 | 6165322 | 6166615 |
| TU95571 | False | 361 | lncRNA | 0.45 | 3 | 6161456 | 6166615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009928 | NA | coding | upstream | 6598 | 6150018 ~ 6154858 (+) |
| AMCG00009930 | NA | coding | upstream | 12065 | 6112296 ~ 6149391 (+) |
| AMCG00009926 | NA | coding | upstream | 162864 | 5986267 ~ 5998592 (+) |
| AMCG00009922 | NA | coding | upstream | 221366 | 5933021 ~ 5940090 (+) |
| AMCG00009923 | ube2r2 | coding | upstream | 266479 | 5890280 ~ 5894977 (+) |
| AMCG00009936 | s100z,LOC107663035,LOC107720888 | coding | downstream | 13788 | 6180403 ~ 6185389 (+) |
| AMCG00009934 | NA | coding | downstream | 58921 | 6225536 ~ 6241567 (+) |
| AMCG00009935 | pde8b,LOC106568179,LOC106563036,LOC106928739 | coding | downstream | 83285 | 6249900 ~ 6284991 (+) |
| AMCG00009940 | scamp1,LOC107599399 | coding | downstream | 363449 | 6530064 ~ 6538910 (+) |
| AMCG00009945 | bhmt,LOC105015174 | coding | downstream | 499075 | 6665690 ~ 6670486 (+) |
| G76486 | NA | non-coding | upstream | 210636 | 5947878 ~ 5950820 (+) |
| G76484 | NA | non-coding | upstream | 215403 | 5945706 ~ 5946053 (+) |
| G76460 | NA | non-coding | upstream | 260474 | 5897310 ~ 5900982 (+) |
| G76434 | NA | non-coding | upstream | 385282 | 5775956 ~ 5776174 (+) |
| G76418 | NA | non-coding | upstream | 389507 | 5771674 ~ 5771949 (+) |
| G76555 | NA | non-coding | downstream | 996 | 6167611 ~ 6168308 (+) |
| G76658 | NA | non-coding | downstream | 575317 | 6741932 ~ 6742239 (+) |
| G76659 | NA | non-coding | downstream | 587906 | 6754521 ~ 6754936 (+) |
| G76663 | NA | non-coding | downstream | 624151 | 6790766 ~ 6792207 (+) |
| G76770 | NA | non-coding | downstream | 1008864 | 7175479 ~ 7231357 (+) |
| AMCG00009929 | sv2c,LOC107755746,LOC107748435,LOC107565680 | other | upstream | 75650 | 6059242 ~ 6085806 (+) |
| AMCG00009915 | NA | other | upstream | 392404 | 5766337 ~ 5769052 (+) |
| AMCG00009897 | NA | other | upstream | 913275 | 5232632 ~ 5248181 (+) |
| AMCG00009898 | tmem167a | other | upstream | 1240572 | 4910970 ~ 4920884 (+) |
| AMCG00009863 | NA | other | upstream | 3392948 | 2752260 ~ 2768508 (+) |
| AMCG00009959 | NA | other | downstream | 875982 | 7042597 ~ 7062734 (+) |
| AMCG00010021 | hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 | other | downstream | 4136311 | 10302926 ~ 10313486 (+) |
| G77423 | NA | other | downstream | 4983011 | 11149626 ~ 11155469 (+) |
| AMCG00010041 | NA | other | downstream | 5123288 | 11289903 ~ 11389245 (+) |
| G77541 | NA | other | downstream | 5534091 | 11700706 ~ 11701081 (+) |
