G76555


Basic Information

Item Value
gene id G76555
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 6167611 ~ 6168308 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95577
CCTCTGCCTTGCCAGCATGAACAGCTGCCTGGATCCCTTTGTGTATTACTTTGTTTCAAAAGAATATAGAGACAGTGTGAAAAACACCCTGTTGTGCAGGAGTGCCCGCACTGTGGAGCAAATGAGGGTGTCCTTCAGCTCGATGAAGTATTCAAAGAAGAGTAACATTTATACATCAGACTCGAGTAACACTCGGACAAGTAGCTGCTGATGATTTGAGCTGTCTGTAGAATCGCATTCCTGGTTTGGTTGATTATGCACTGAATTTTACCTGCCTACACATTTTAGGATCTCGTATTATGATTGCTGTCAGGATAAGGGGCGCAAACGTGGCTCTGTAGTAAGATGTGATCGGGGTGATGGTATATATGGTGTATATGACCCACAAAAACAAAGGAGATTAAAACGTATGACCATCATCTGTCATTGGGCAGCtcttgttaattttatttagatacaattttaattttaagatgcAGCTCCAATcacagcaaatgtatttatttaccgCCTATTCTCGCTGTGTGTTAGTATCTTGTGTAAGctgttacacatttttaaatatttatttttactgataaacattttactttcttcAAGCACCCATTACTGTTCTGTGAActtagtttttaatacactcatGAATGAAATATATGAGGACATTTAATagtttatgtacatttttatattctaGTATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95577 True 698 lncRNA 0.37 1 6167611 6168308

Neighbor

gene id symbol gene type direction distance location
AMCG00009928 NA coding upstream 12753 6150018 ~ 6154858 (+)
AMCG00009930 NA coding upstream 18220 6112296 ~ 6149391 (+)
AMCG00009926 NA coding upstream 169019 5986267 ~ 5998592 (+)
AMCG00009922 NA coding upstream 227521 5933021 ~ 5940090 (+)
AMCG00009923 ube2r2 coding upstream 272634 5890280 ~ 5894977 (+)
AMCG00009936 s100z,LOC107663035,LOC107720888 coding downstream 12095 6180403 ~ 6185389 (+)
AMCG00009934 NA coding downstream 57228 6225536 ~ 6241567 (+)
AMCG00009935 pde8b,LOC106568179,LOC106563036,LOC106928739 coding downstream 81592 6249900 ~ 6284991 (+)
AMCG00009940 scamp1,LOC107599399 coding downstream 361756 6530064 ~ 6538910 (+)
AMCG00009945 bhmt,LOC105015174 coding downstream 497382 6665690 ~ 6670486 (+)
G76550 NA non-coding upstream 996 6161456 ~ 6166615 (+)
G76486 NA non-coding upstream 216791 5947878 ~ 5950820 (+)
G76484 NA non-coding upstream 221558 5945706 ~ 5946053 (+)
G76460 NA non-coding upstream 266629 5897310 ~ 5900982 (+)
G76434 NA non-coding upstream 391437 5775956 ~ 5776174 (+)
G76658 NA non-coding downstream 573624 6741932 ~ 6742239 (+)
G76659 NA non-coding downstream 586213 6754521 ~ 6754936 (+)
G76663 NA non-coding downstream 622458 6790766 ~ 6792207 (+)
G76770 NA non-coding downstream 1007171 7175479 ~ 7231357 (+)
G76799 NA non-coding downstream 1102527 7270835 ~ 7271745 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 81805 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 398559 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 919430 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 1246727 4910970 ~ 4920884 (+)
AMCG00009863 NA other upstream 3399103 2752260 ~ 2768508 (+)
AMCG00009959 NA other downstream 874289 7042597 ~ 7062734 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 4134618 10302926 ~ 10313486 (+)
G77423 NA other downstream 4981318 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 5121595 11289903 ~ 11389245 (+)
G77541 NA other downstream 5532398 11700706 ~ 11701081 (+)

Expression


Co-expression Network