G76663


Basic Information

Item Value
gene id G76663
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 6790766 ~ 6792207 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95713
tggtcttccattacattttacacacttGAGACCAGCTGCAAATACACTAGGCTATTTCATAGTAAGAGATATCGATATTGTGTATTTGACTTACCCCATTTTGGTGGATTGTATGGTGACAATGACTCCGTCGGTGCAAATGAAAGATGCTCCTGCTCAATGGTTATTAATGGTCACTATTCTCGGTTTCAAGGGTCCGTTTTCTCTATCACACAGCTGGTAAAGAGGGTTGATGGGGGTGGAGAGGCTGTCCAGATTGGGCTCCTTCAGCAGGACATGACTGTTTCCATACAGCTCTCTGCGGCTTTAATTCagacacatttcaaaacaagccAAAGAAATGCACCGATGTCCAAGAAAATGCATGACGTGGAAAGTGATTATTCTTCCCTTGCACGAATTACCATTCCCAGTTCTCATTCGCAATGATGGATTCCCATATAGACACGTTATACCAATACAGCTACTTTGAAACAGAATGAAACGTCCTTTTAAAAAACCCCAATCCCGAATGCCTAAGTAACAGCACTGTAAGTAAGCTGAATACTGTTATTATTCCGTGGTTTTGAAGGCGGAAAAGGCAGCGAGTATGCGTTGAAATGGTGCACCGAGGGCTGTCTGCCTTCTCTGATCTCCAAACGACCCTTAAATATCCCCTCAGAGACGGGCTGCTACTCTGTGCTCTTGCATCACGCCCTTGCTATTTACTTTCTAAAACTGACACCTCTCCACAATGCGACTGGCTCGCCTGCatgcaagaacaaaaaatgcTGAACCTGCAATCCAGCCCCGCTTCTTCAGTTACTATGTGTCCATTCTTCATTCATTCGTGTTGCAGCTCCTTATCTCGGATGTGCCATCCAAATTCCTCCAGAGCAAATCAAAACGGACTGTCACATGGGCACACGGTGGGGGGGAGGAATCAAagcaacagaacaaaataaaaaataaaaatgcaaatattcacCACAGTTGTCCTTTGCAAAGCAGCCTTTTCAtgggcattttttattttctcgcttctttttttttttctttcgctTGTTTGCCCTGTTAAAAGACCTGGTGCATTCTCATGGCTCCATCACCATCCCTGTGTTTCACAAGACCAGAGAAATGTGCATTACGCTTAATGTCCGTGTGATGAACCtggcaaaaatgtttttatcctACTAAGTGATCTTTAATACCAAAAAAGGTTGTTGGTTTTTCAACATGAACTACTGcacagcaatttttttttattccatctcCTTTCCAGCTGCTTTCACACGGCTGTACATCTGTTCTCATCCCAGTCAATATCTGTCTCCATCCTCTGTTCACTGCCAGTATTAAATACACCGACGTCACCACGCCACCCTCCGCACTGACGTCACTGCATGCTCCTGGGACTGACGTCATTCCCGTCAAGGGGATGACGTCCAGTTACTCCAGGAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95713 True 1442 lncRNA 0.44 1 6790766 6792207

Neighbor

gene id symbol gene type direction distance location
AMCG00009948 NA coding upstream 66131 6700420 ~ 6724635 (+)
AMCG00009949 NA coding upstream 104917 6684767 ~ 6685849 (+)
AMCG00009945 bhmt,LOC105015174 coding upstream 120280 6665690 ~ 6670486 (+)
AMCG00009940 scamp1,LOC107599399 coding upstream 251856 6530064 ~ 6538910 (+)
AMCG00009935 pde8b,LOC106568179,LOC106563036,LOC106928739 coding upstream 505775 6249900 ~ 6284991 (+)
AMCG00009953 NA coding downstream 4722 6796929 ~ 6810324 (+)
AMCG00009955 NA coding downstream 18857 6811064 ~ 6814174 (+)
AMCG00009952 NA coding downstream 22075 6814282 ~ 6833737 (+)
AMCG00009954 NA coding downstream 66225 6858432 ~ 6877987 (+)
AMCG00009958 setbp1,LOC107555500,LOC107756308,LOC107703262 coding downstream 210796 7003003 ~ 7010244 (+)
G76659 NA non-coding upstream 35830 6754521 ~ 6754936 (+)
G76658 NA non-coding upstream 48527 6741932 ~ 6742239 (+)
G76555 NA non-coding upstream 622458 6167611 ~ 6168308 (+)
G76550 NA non-coding upstream 624151 6161456 ~ 6166615 (+)
G76486 NA non-coding upstream 839946 5947878 ~ 5950820 (+)
G76770 NA non-coding downstream 383272 7175479 ~ 7231357 (+)
G76799 NA non-coding downstream 478628 7270835 ~ 7271745 (+)
G76807 NA non-coding downstream 488769 7280976 ~ 7287399 (+)
G76827 NA non-coding downstream 642449 7434656 ~ 7435547 (+)
G76859 NA non-coding downstream 823751 7615958 ~ 7648166 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 704960 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 1021714 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 1542585 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 1869882 4910970 ~ 4920884 (+)
AMCG00009863 NA other upstream 4022258 2752260 ~ 2768508 (+)
AMCG00009959 NA other downstream 250390 7042597 ~ 7062734 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 3510719 10302926 ~ 10313486 (+)
G77423 NA other downstream 4357419 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 4497696 11289903 ~ 11389245 (+)
G77541 NA other downstream 4908499 11700706 ~ 11701081 (+)

Expression


Co-expression Network