G76827


Basic Information

Item Value
gene id G76827
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 7434656 ~ 7435547 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU95904
CACTTTGGATAGAAaactttattgaaaaaatatacagcaatttgtagttatacagacacacacaggatcACTGTGGGATCACTGGGATGAAATCAGACATAGAAGAAGCAGAATCgtcttttaatttgtatgaaaaTGGATTAAGTGTGAAAACAGGTTATGTTTGGCTGGAGTCCTACTGCAAATGTCtctcattaaaatactataCCATATTATTTCAACGGGATTAAGGTCTGGTTACTGGGGAGACCACAGCAACCATTATTAACACCTGTTGTTCTCCCACCTCACTTTCTCTTAATTAGGAGAGCAAATCCAAAGTCACCAATTATAAATTAAGATCTCAGCAGCTGATGCAGTATGGTTATAATAGGAGGAATTATTCTCTCCCTGATAACCATCATCACAGACAGTGATGTGCAGTTTCTGGGCTGGTCAACCTGGTTGCTTCAAGTCACCTCTTTCTGTACTGCAAGGAGTAGAAGAGCCACAATAACCCACCATGACAACCTTCCTGCATTCATATAGGCATCTGGTGTGTGTACAATTCAGCACAACAACTTTCTTGTGGTTCCCTTCACACAGTACCATTCCTTGCACAGGCAAACTGGATACCCAATATCATTTTATTGCAGTCAACTTACAAAAAGCAATATGAGGAATAATACTTCAATGGAGGTAGAATGCCACTAAAATGTATCCACTGTTGTGTTTACAAATGGCCACTAAACATTTTcatgaaatgttttgtgtgtggctGTTCCCTGCTTTGTAGGATTGGAGTAAGAAACACAGGTGATCATGTAATTTGGAccaaatatacactcacctaaaggctaattaggaacacctgttcaatttctcattaatgcaattatctaaccaaccaaNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95904 True 892 lncRNA 0.38 1 7434656 7435547

Neighbor

gene id symbol gene type direction distance location
AMCG00009961 NA coding upstream 141754 7291064 ~ 7292902 (+)
AMCG00009960 NA coding upstream 230012 7193174 ~ 7204644 (+)
AMCG00009966 NA coding upstream 251421 7182629 ~ 7183235 (+)
AMCG00009958 setbp1,LOC107555500,LOC107756308,LOC107703262 coding upstream 424412 7003003 ~ 7010244 (+)
AMCG00009954 NA coding upstream 556669 6858432 ~ 6877987 (+)
AMCG00009967 riok2 coding downstream 84346 7519893 ~ 7528002 (+)
AMCG00009973 NA coding downstream 96340 7531887 ~ 7552651 (+)
AMCG00009971 NA coding downstream 126947 7562494 ~ 7588246 (+)
AMCG00009969 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding downstream 179389 7614936 ~ 7631852 (+)
AMCG00009970 NA coding downstream 203032 7638579 ~ 7642526 (+)
G76807 NA non-coding upstream 147257 7280976 ~ 7287399 (+)
G76799 NA non-coding upstream 162911 7270835 ~ 7271745 (+)
G76770 NA non-coding upstream 203299 7175479 ~ 7231357 (+)
G76663 NA non-coding upstream 642449 6790766 ~ 6792207 (+)
G76659 NA non-coding upstream 679720 6754521 ~ 6754936 (+)
G76859 NA non-coding downstream 180411 7615958 ~ 7648166 (+)
G76863 vcp,LOC107602017,LOC107552546,LOC107676650,LOC107708640,LOC107681079,LOC107393925 non-coding downstream 213943 7649490 ~ 7650191 (+)
G76864 NA non-coding downstream 216175 7651722 ~ 7652831 (+)
G76935 NA non-coding downstream 453936 7889483 ~ 7894390 (+)
G77012 NA non-coding downstream 878569 8314116 ~ 8317675 (+)
AMCG00009959 NA other upstream 371922 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 1348850 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 1665604 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 2186475 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 2513772 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 2867379 10302926 ~ 10313486 (+)
G77423 NA other downstream 3714079 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 3854356 11289903 ~ 11389245 (+)
G77541 NA other downstream 4265159 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 7556372 14991919 ~ 15032181 (+)

Expression


Co-expression Network