G77073


Basic Information

Item Value
gene id G77073
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 8808351 ~ 8808607 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU96195
AACATGATGAGGAAATTCAAGCACGTTCACATGGGTGTGTTCCTAGCTTGTCCTTCTGATTGGCTTCTGGCTGGGTGATGAACAGCTGCCGCCTGCTGAAGACCTGCCATCACTTGTCTCAATGTAGTCTAAGATGTTGGGATACCTCTCTCATATCTGCACCTCAGGAGATGGCCGGTGGATCGTTCTTCATTGAGTAACGAGGGTCTTTTGTATGGGACATCGTGCTAAACCTCATGTGAAATAATGCTGACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96195 True 257 lncRNA 0.48 1 8808351 8808607

Neighbor

gene id symbol gene type direction distance location
AMCG00009996 ndufs4,LOC107661235,LOC107602025,LOC107599174,LOC107708631 coding upstream 464 8804010 ~ 8807887 (+)
AMCG00009995 NA coding upstream 32340 8769477 ~ 8776011 (+)
AMCG00009992 NA coding upstream 48323 8724292 ~ 8760028 (+)
AMCG00009993 NA coding upstream 112290 8668875 ~ 8696061 (+)
AMCG00009990 isl1,LOC107661270,LOC107374027,LOC107708623 coding upstream 377718 8404843 ~ 8430633 (+)
AMCG00009997 NA coding downstream 169347 8977954 ~ 8978388 (+)
AMCG00009999 snx18 coding downstream 172148 8980755 ~ 8997868 (+)
AMCG00009998 NA coding downstream 249869 9058476 ~ 9069701 (+)
AMCG00010003 wdfy3 coding downstream 264634 9073241 ~ 9171648 (+)
AMCG00010002 cds1,LOC107602031,LOC107744867,LOC107663388 coding downstream 369432 9178039 ~ 9204099 (+)
G77049 NA non-coding upstream 108234 8697678 ~ 8700117 (+)
G77028 NA non-coding upstream 369565 8438507 ~ 8438786 (+)
G77012 NA non-coding upstream 490676 8314116 ~ 8317675 (+)
G76935 NA non-coding upstream 913961 7889483 ~ 7894390 (+)
G76864 NA non-coding upstream 1155520 7651722 ~ 7652831 (+)
G77126 NA non-coding downstream 395735 9204342 ~ 9205423 (+)
G77125 tmem175,LOC107744870 non-coding downstream 397028 9205635 ~ 9208519 (+)
G77135 NA non-coding downstream 542984 9351591 ~ 9351870 (+)
G77192 NA non-coding downstream 607823 9416430 ~ 9419370 (+)
G77198 NA non-coding downstream 620636 9429243 ~ 9431629 (+)
AMCG00009959 NA other upstream 1745617 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 2722545 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 3039299 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 3560170 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 3887467 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 1494319 10302926 ~ 10313486 (+)
G77423 NA other downstream 2341019 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 2481296 11289903 ~ 11389245 (+)
G77541 NA other downstream 2892099 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 6183312 14991919 ~ 15032181 (+)

Expression


Co-expression Network