Gene
RNA
| Item | Value |
|---|---|
| gene id | G77253 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 9874868 ~ 9940435 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96413 | True | 335 | lncRNA | 0.47 | 2 | 9874868 | 9940435 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010013 | antxr2 | coding | upstream | 161588 | 9690573 ~ 9713280 (+) |
| AMCG00010012 | NA | coding | upstream | 186769 | 9672221 ~ 9688099 (+) |
| AMCG00010006 | prkg2,LOC103134980 | coding | upstream | 460735 | 9392881 ~ 9414133 (+) |
| AMCG00010007 | rasgef1b,rasgef1ba,LOC107663389 | coding | upstream | 499124 | 9360116 ~ 9375744 (+) |
| AMCG00010005 | NA | coding | upstream | 524557 | 9347026 ~ 9350311 (+) |
| AMCG00010017 | smad2,LOC107743055,LOC108235010 | coding | downstream | 205118 | 10145553 ~ 10154362 (+) |
| AMCG00010020 | NA | coding | downstream | 351539 | 10291974 ~ 10299643 (+) |
| AMCG00010025 | NA | coding | downstream | 392785 | 10333220 ~ 10359574 (+) |
| AMCG00010027 | NA | coding | downstream | 471271 | 10411706 ~ 10412110 (+) |
| AMCG00010026 | NA | coding | downstream | 813357 | 10753792 ~ 10754548 (+) |
| G77233 | NA | non-coding | upstream | 131768 | 9741789 ~ 9743100 (+) |
| G77207 | NA | non-coding | upstream | 313062 | 9561309 ~ 9561806 (+) |
| G77201 | NA | non-coding | upstream | 356856 | 9517658 ~ 9518012 (+) |
| G77198 | NA | non-coding | upstream | 443239 | 9429243 ~ 9431629 (+) |
| G77192 | NA | non-coding | upstream | 455498 | 9416430 ~ 9419370 (+) |
| G77285 | fras1 | non-coding | downstream | 55919 | 9996354 ~ 9997885 (+) |
| G77346 | NA | non-coding | downstream | 374911 | 10315346 ~ 10316098 (+) |
| G77349 | sigmar1,LOC107573076 | non-coding | downstream | 390285 | 10330720 ~ 10332498 (+) |
| G77395 | NA | non-coding | downstream | 1037228 | 10977663 ~ 10978504 (+) |
| G77445 | NA | non-coding | downstream | 1414656 | 11355091 ~ 11355362 (+) |
| AMCG00009959 | NA | other | upstream | 2812134 | 7042597 ~ 7062734 (+) |
| AMCG00009929 | sv2c,LOC107755746,LOC107748435,LOC107565680 | other | upstream | 3789062 | 6059242 ~ 6085806 (+) |
| AMCG00009915 | NA | other | upstream | 4105816 | 5766337 ~ 5769052 (+) |
| AMCG00009897 | NA | other | upstream | 4626687 | 5232632 ~ 5248181 (+) |
| AMCG00009898 | tmem167a | other | upstream | 4953984 | 4910970 ~ 4920884 (+) |
| AMCG00010021 | hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 | other | downstream | 362491 | 10302926 ~ 10313486 (+) |
| G77423 | NA | other | downstream | 1209191 | 11149626 ~ 11155469 (+) |
| AMCG00010041 | NA | other | downstream | 1349468 | 11289903 ~ 11389245 (+) |
| G77541 | NA | other | downstream | 1760271 | 11700706 ~ 11701081 (+) |
| AMCG00010101 | NA | other | downstream | 5051484 | 14991919 ~ 15032181 (+) |
