G77255


Basic Information

Item Value
gene id G77255
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 9922721 ~ 9926110 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU96416
AACTTCTTTATTGCATTATTAGACAGCAGAACAGCATGATAAATATTAAACGTGTTAAAACAAACGGTAAATGAAAGATAGAAAATTGTTTCACATAGAAGCCTTAATTCAACATTGTTCCACAGATTAAAAAAGTAGTACATTGCTTTATTAATTCAGATGAATGTGCTTATGCTCATTAAATACTCTTCTGAGGTTTTCCGTTCATTTACATTAACACGTCTGGTGAAATTAATtcgggttaaaaaaaaaacaaaaaaactttatttttgtggttCAAGGGTGAAAATCAGGTCGGTGCTTAAATGTGGAAAGTGCACTTGTTTTGACTACCTGTTCAGATGTAACTGATTTGTGATTCTGTCAATTTATTAAGCCTGTTGGAGtagttacatttttactttcccTTTAGTCTTTTAATTTGAAGCTTGACAAAATGTTCCTCTAAGCTATGCaacattatttacattgtttttgtgatgCCTAGCTAATGAtactgacattttcattttcattcttaaCTATATAGTTACCCTTTAACATCATATTgctatattatttatgtttgataAATCACCTCCAAACTATCACAGGAATACTGCGATGTGTAGGTGTTCTAGATCACAGCAAGTCCATCCGTATTTATAACCACACACTTTCTATTGGGACCATGGTATTCTACTCATATTTCTCAACTCCTAGAGTAAGCAACTGTTTTTAGTCTCATAGAAAACTCAAATTCTAACCTTGAAAGGtaaaagaaatggagaaaaagcAACCGGGTAAAACAATTCTCTCACTTCAATTGTATCTAGACCTCTAGTAGGTGAAATATGAACAATGAAAACACTATGACAAAGtagaaataaaaagcaaaaagttTAATGGTGACATGGAATTTAAAGGCCTgtcaaaataaagcatttcttcTGCAGTAAAGAGCAGTATCAGCCTGGGTGTAGTGGCTCAGAGGTACTGTGCAGCAGGGTGGGGCTCGGCCCATAAGGCTTTGTGGTGTGAAATGAATCTTATTTATTAGTAGATTGAGTAGGAAGCAGCTATCTACATGTAGAGCTCGGCAGCCACTCAAGCGGTCGATGATGGAGCTAGCTCATTGTCACAGTAAGATCTCAGTCGAGCTGAGAGGGTGTATCGATCTCCCGAGAAGAGAAGGAAACTATTCACATCAGCCTCTTCAAGAGCAGAGCAGCCCTGTGAACCAAAACAACATGGTATAATGCAGCATAAAGGCTTATCAGCTAAAACAGGTATGGGCTAAAAGTTAATGCATATAGAATCTAGACAAATCTATATTCCAcaggattgttttattttttttCTTTTATCTTTTGGCAATCAAGTATATCCACAGCAAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96416 True 1379 lncRNA 0.35 2 9922721 9926110

Neighbor

gene id symbol gene type direction distance location
AMCG00010014 LOC106570899,LOC108433513,LOC107713330,LOC102780134 coding upstream 3550 9914042 ~ 9919171 (+)
AMCG00010013 antxr2 coding upstream 209441 9690573 ~ 9713280 (+)
AMCG00010012 NA coding upstream 234622 9672221 ~ 9688099 (+)
AMCG00010006 prkg2,LOC103134980 coding upstream 508588 9392881 ~ 9414133 (+)
AMCG00010007 rasgef1b,rasgef1ba,LOC107663389 coding upstream 546977 9360116 ~ 9375744 (+)
AMCG00010017 smad2,LOC107743055,LOC108235010 coding downstream 219443 10145553 ~ 10154362 (+)
AMCG00010020 NA coding downstream 365864 10291974 ~ 10299643 (+)
AMCG00010025 NA coding downstream 407110 10333220 ~ 10359574 (+)
AMCG00010027 NA coding downstream 485596 10411706 ~ 10412110 (+)
AMCG00010026 NA coding downstream 827682 10753792 ~ 10754548 (+)
G77233 NA non-coding upstream 179621 9741789 ~ 9743100 (+)
G77207 NA non-coding upstream 360915 9561309 ~ 9561806 (+)
G77201 NA non-coding upstream 404709 9517658 ~ 9518012 (+)
G77198 NA non-coding upstream 491092 9429243 ~ 9431629 (+)
G77192 NA non-coding upstream 503351 9416430 ~ 9419370 (+)
G77285 fras1 non-coding downstream 70244 9996354 ~ 9997885 (+)
G77346 NA non-coding downstream 389236 10315346 ~ 10316098 (+)
G77349 sigmar1,LOC107573076 non-coding downstream 404610 10330720 ~ 10332498 (+)
G77395 NA non-coding downstream 1051553 10977663 ~ 10978504 (+)
G77445 NA non-coding downstream 1428981 11355091 ~ 11355362 (+)
AMCG00009959 NA other upstream 2859987 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 3836915 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 4153669 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 4674540 5232632 ~ 5248181 (+)
AMCG00009898 tmem167a other upstream 5001837 4910970 ~ 4920884 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other downstream 376816 10302926 ~ 10313486 (+)
G77423 NA other downstream 1223516 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 1363793 11289903 ~ 11389245 (+)
G77541 NA other downstream 1774596 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 5065809 14991919 ~ 15032181 (+)

Expression


Co-expression Network