G77395


Basic Information

Item Value
gene id G77395
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 10977663 ~ 10978504 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU96593
AGGATTTCAGCGGCAGCCTGTTCGCTGTTTTGAGACGGGGATTGGGGTTGTGGAGGAGAAGCTTTGTGATTCAGACAGCAGACCAGAAGCCCGGCAAAGGAAGTGTAAGAACATGGATTGTCCAGCAAGGTGGTGGGTTGGTGGCTGGCAGTTGTGTTCTGCGACTTGTGGGCCGTCGGGCGTAAAGAAACGCACCGTGCTGTGTGTGCGGACCGTGGGTGCTGAAGAGCGTGTTCTCCCCCCTGCAGAGTGCAAGCACCTCCTGAAGCCCAAGGCTCTTGTGCCGTGTCAGAGGGACACGCCCTGTGGATCAGAGTGGACCGTGGGGAACTGGAGCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96593 True 340 lncRNA 0.59 2 10977663 10978504

Neighbor

gene id symbol gene type direction distance location
AMCG00010028 NA coding upstream 67721 10894209 ~ 10909942 (+)
AMCG00010024 cntfr,LOC106572571 coding upstream 178984 10793932 ~ 10798679 (+)
AMCG00010026 NA coding upstream 223115 10753792 ~ 10754548 (+)
AMCG00010027 NA coding upstream 565553 10411706 ~ 10412110 (+)
AMCG00010025 NA coding upstream 618089 10333220 ~ 10359574 (+)
AMCG00010034 rxfp3,LOC107589282,LOC107681130,LOC107579623,LOC107706441,LOC107750484,LOC107703594 coding downstream 106176 11084680 ~ 11085921 (+)
AMCG00010037 NA coding downstream 198588 11177092 ~ 11181005 (+)
AMCG00010036 NA coding downstream 237207 11215711 ~ 11244369 (+)
AMCG00010043 NA coding downstream 450055 11428559 ~ 11439004 (+)
AMCG00010048 NA coding downstream 462135 11440639 ~ 11457795 (+)
G77349 sigmar1,LOC107573076 non-coding upstream 645165 10330720 ~ 10332498 (+)
G77346 NA non-coding upstream 661565 10315346 ~ 10316098 (+)
G77285 fras1 non-coding upstream 979778 9996354 ~ 9997885 (+)
G77253 NA non-coding upstream 1037228 9874868 ~ 9940435 (+)
G77255 NA non-coding upstream 1051553 9922721 ~ 9926110 (+)
G77445 NA non-coding downstream 376587 11355091 ~ 11355362 (+)
G77517 NA non-coding downstream 606450 11584954 ~ 11586100 (+)
G77515 NA non-coding downstream 612714 11591218 ~ 11639790 (+)
G77543 NA non-coding downstream 763144 11741648 ~ 11743415 (+)
G77621 NA non-coding downstream 1046317 12024821 ~ 12025152 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other upstream 664177 10302926 ~ 10313486 (+)
AMCG00009959 NA other upstream 3914929 7042597 ~ 7062734 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other upstream 4891857 6059242 ~ 6085806 (+)
AMCG00009915 NA other upstream 5208611 5766337 ~ 5769052 (+)
AMCG00009897 NA other upstream 5729482 5232632 ~ 5248181 (+)
G77423 NA other downstream 171122 11149626 ~ 11155469 (+)
AMCG00010041 NA other downstream 311399 11289903 ~ 11389245 (+)
G77541 NA other downstream 722202 11700706 ~ 11701081 (+)
AMCG00010101 NA other downstream 4013415 14991919 ~ 15032181 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other downstream 4545942 15524446 ~ 15534087 (+)

Expression


Co-expression Network