Gene
RNA
| Item | Value |
|---|---|
| gene id | G77661 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 12148931 ~ 12152321 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0004953 | icosanoid receptor activity | molecular_function |
| GO:0004954 | prostanoid receptor activity | molecular_function |
| GO:0004955 | prostaglandin receptor activity | molecular_function |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96927 | True | 1190 | lncRNA | 0.40 | 4 | 12148931 | 12152321 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010062 | capsl | coding | upstream | 8901 | 12137123 ~ 12140030 (+) |
| AMCG00010061 | lmbrd2,LOC106568164 | coding | upstream | 32416 | 12107561 ~ 12116515 (+) |
| AMCG00010063 | NA | coding | upstream | 54132 | 12085846 ~ 12094799 (+) |
| AMCG00010059 | NA | coding | upstream | 63868 | 12059775 ~ 12085063 (+) |
| AMCG00010057 | NA | coding | upstream | 241826 | 11871831 ~ 11907105 (+) |
| AMCG00010068 | NA | coding | downstream | 195669 | 12347990 ~ 12359546 (+) |
| AMCG00010067 | NA | coding | downstream | 212838 | 12365159 ~ 12370529 (+) |
| AMCG00010071 | NA | coding | downstream | 227117 | 12379438 ~ 12416428 (+) |
| AMCG00010073 | NA | coding | downstream | 271825 | 12424146 ~ 12436820 (+) |
| AMCG00010074 | NA | coding | downstream | 285398 | 12437719 ~ 12440223 (+) |
| G77621 | NA | non-coding | upstream | 123779 | 12024821 ~ 12025152 (+) |
| G77543 | NA | non-coding | upstream | 405516 | 11741648 ~ 11743415 (+) |
| G77515 | NA | non-coding | upstream | 509141 | 11591218 ~ 11639790 (+) |
| G77517 | NA | non-coding | upstream | 562831 | 11584954 ~ 11586100 (+) |
| G77445 | NA | non-coding | upstream | 793569 | 11355091 ~ 11355362 (+) |
| G77669 | NA | non-coding | downstream | 17777 | 12170098 ~ 12171321 (+) |
| G77670 | NA | non-coding | downstream | 24907 | 12177228 ~ 12177489 (+) |
| G77673 | NA | non-coding | downstream | 56692 | 12209013 ~ 12214521 (+) |
| G77796 | NA | non-coding | downstream | 1247587 | 13399908 ~ 13400196 (+) |
| G77958 | NA | non-coding | downstream | 2807951 | 14960272 ~ 14961505 (+) |
| G77541 | NA | other | upstream | 447850 | 11700706 ~ 11701081 (+) |
| AMCG00010041 | NA | other | upstream | 759686 | 11289903 ~ 11389245 (+) |
| G77423 | NA | other | upstream | 993462 | 11149626 ~ 11155469 (+) |
| AMCG00010021 | hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 | other | upstream | 1835445 | 10302926 ~ 10313486 (+) |
| AMCG00009959 | NA | other | upstream | 5086197 | 7042597 ~ 7062734 (+) |
| AMCG00010101 | NA | other | downstream | 2839598 | 14991919 ~ 15032181 (+) |
| AMCG00010116 | LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 | other | downstream | 3372125 | 15524446 ~ 15534087 (+) |
| AMCG00010119 | NA | other | downstream | 3476024 | 15628345 ~ 15642841 (+) |
| G78198 | NA | other | downstream | 3905210 | 16057531 ~ 16060087 (+) |
| AMCG00010144 | adamts3,LOC103134868 | other | downstream | 4313243 | 16465564 ~ 16547620 (+) |
