G78012


Basic Information

Item Value
gene id G78012
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 15228893 ~ 15232199 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97343
ctcattttcaattttttccttTAGTGCTTTTACGTCTCCTCTCCGTCGATGTCGATCTTGAAGGTCTGCTGCTGCAGGGTTTTCAGGGTGATCTGCATCTTGGCGGCACTCGGGAACAAGTGTGCTGGGTTTCTTCTCACTCGGTTTCGGTCCAAAAGCTCCGGGTTCAGTTTCCTGACTATTTTCGCTAGCTCATCACGGCCTGTTCGCCGCCATTACTCTCGGCCTGTTTTCAGCGCATAAACAAAACACCCACCCCCAGAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97343 True 266 lncRNA 0.50 2 15228893 15232199

Neighbor

gene id symbol gene type direction distance location
AMCG00010110 NA coding upstream 11347 15212005 ~ 15217546 (+)
AMCG00010109 NA coding upstream 129888 15085102 ~ 15099005 (+)
AMCG00010102 add1,LOC107737461 coding upstream 228137 14978146 ~ 15000756 (+)
AMCG00010099 NA coding upstream 487924 14700320 ~ 14740969 (+)
AMCG00010098 ctif coding upstream 557491 14656485 ~ 14671402 (+)
AMCG00010111 LOC107735115 coding downstream 207792 15439991 ~ 15442927 (+)
AMCG00010115 NA coding downstream 260424 15492623 ~ 15514695 (+)
AMCG00010117 gldc coding downstream 302798 15534997 ~ 15558177 (+)
AMCG00010124 NA coding downstream 467900 15700099 ~ 15709506 (+)
AMCG00010125 NA coding downstream 515926 15748125 ~ 15800521 (+)
G78007 NA non-coding upstream 7238 15204674 ~ 15221655 (+)
G77954 NA non-coding upstream 181038 15004034 ~ 15047855 (+)
G77958 NA non-coding upstream 267388 14960272 ~ 14961505 (+)
G77796 NA non-coding upstream 1828697 13399908 ~ 13400196 (+)
G77673 NA non-coding upstream 3014372 12209013 ~ 12214521 (+)
G78032 NA non-coding downstream 74851 15307050 ~ 15308646 (+)
G78100 NA non-coding downstream 421789 15653988 ~ 15654643 (+)
G78127 NA non-coding downstream 487980 15720179 ~ 15723894 (+)
G78129 NA non-coding downstream 496941 15729140 ~ 15735727 (+)
G78299 NA non-coding downstream 1440287 16672486 ~ 16672909 (+)
AMCG00010101 NA other upstream 196712 14991919 ~ 15032181 (+)
G77541 NA other upstream 3527812 11700706 ~ 11701081 (+)
AMCG00010041 NA other upstream 3839648 11289903 ~ 11389245 (+)
G77423 NA other upstream 4073424 11149626 ~ 11155469 (+)
AMCG00010021 hdhd2,ier3ip1,LOC107743237,LOC107738843,LOC102780036,LOC106633120,LOC103397450,LOC106527492 other upstream 4915407 10302926 ~ 10313486 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other downstream 292247 15524446 ~ 15534087 (+)
AMCG00010119 NA other downstream 396146 15628345 ~ 15642841 (+)
G78198 NA other downstream 825332 16057531 ~ 16060087 (+)
AMCG00010144 adamts3,LOC103134868 other downstream 1233365 16465564 ~ 16547620 (+)
AMCG00010164 NA other downstream 1987837 17220036 ~ 17225340 (+)

Expression


Co-expression Network