G78129


Basic Information

Item Value
gene id G78129
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 15729140 ~ 15735727 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97478
CCCGTTTTCTCATCAATGACTTTAATGCCAGACAGTGATATATTCACCCAGATTCTCTGTTTGTGCTGGCCCCGGGAACGGGCAGCCACTGCCATGCCctgtCTTCAGTTTCATCATTGAATCCTGGCTCATTTTATCTCCTCTTGCCTCAGGAACATCATCGATACCAATCAGTTTGGCTTTATATCGAACTCCGTCACCTTTGAATCTAGCCAGCAAGAACTCATCTGTCTTCTCTGGACCTttttttcttttctttttttgacgGAGTCTTCACAGGGCCCAGGTCTGCCTGGTTGGCAATGTTGTTCTCAACCTCTGTCGACATGATTCGAGGCCAGCCTCACAAAATccacagaaatgtataaatggaaCGCAGCTCCTCAACAGTGCAGGCTTGACCAGCGCTTCTCAGCAGAGACGCATACTTCACAGAGCCTACGGAGAGGGGGACAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97478 True 458 lncRNA 0.48 3 15729140 15735727

Neighbor

gene id symbol gene type direction distance location
AMCG00010124 NA coding upstream 19634 15700099 ~ 15709506 (+)
AMCG00010117 gldc coding upstream 170963 15534997 ~ 15558177 (+)
AMCG00010115 NA coding upstream 214445 15492623 ~ 15514695 (+)
AMCG00010111 LOC107735115 coding upstream 286213 15439991 ~ 15442927 (+)
AMCG00010110 NA coding upstream 511594 15212005 ~ 15217546 (+)
AMCG00010125 NA coding downstream 12398 15748125 ~ 15800521 (+)
AMCG00010127 tmem8b,si:dkey-84j12.1 coding downstream 154731 15890458 ~ 15912424 (+)
AMCG00010134 NA coding downstream 206882 15942609 ~ 15943250 (+)
AMCG00010128 tars,LOC107700064,LOC108255896,LOC107727452,LOC107755726 coding downstream 236157 15971884 ~ 15984826 (+)
AMCG00010126 NA coding downstream 250448 15986175 ~ 15988477 (+)
G78127 NA non-coding upstream 5246 15720179 ~ 15723894 (+)
G78100 NA non-coding upstream 74497 15653988 ~ 15654643 (+)
G78032 NA non-coding upstream 420494 15307050 ~ 15308646 (+)
G78012 NA non-coding upstream 496941 15228893 ~ 15232199 (+)
G78007 NA non-coding upstream 507485 15204674 ~ 15221655 (+)
G78299 NA non-coding downstream 936759 16672486 ~ 16672909 (+)
G78300 NA non-coding downstream 938382 16674109 ~ 16674619 (+)
G78302 NA non-coding downstream 947190 16682917 ~ 16683174 (+)
G78303 NA non-coding downstream 953058 16688785 ~ 16689872 (+)
G78316 NA non-coding downstream 1156502 16892229 ~ 16892600 (+)
AMCG00010119 NA other upstream 86299 15628345 ~ 15642841 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other upstream 195053 15524446 ~ 15534087 (+)
AMCG00010101 NA other upstream 696959 14991919 ~ 15032181 (+)
G77541 NA other upstream 4028059 11700706 ~ 11701081 (+)
AMCG00010041 NA other upstream 4339895 11289903 ~ 11389245 (+)
G78198 NA other downstream 321804 16057531 ~ 16060087 (+)
AMCG00010144 adamts3,LOC103134868 other downstream 729837 16465564 ~ 16547620 (+)
AMCG00010164 NA other downstream 1484309 17220036 ~ 17225340 (+)
AMCG00010160 NA other downstream 1509858 17245585 ~ 17247150 (+)
G78396 NA other downstream 1538660 17274387 ~ 17277998 (+)

Expression


Co-expression Network