G78381


Basic Information

Item Value
gene id G78381
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17226891 ~ 17228845 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97785
GGATGACATATAAATGGATGTGAAAGACTCACTGAGGTCATGAAGCTGGTTGAATAACAGGCAAGATGAGGAGCATTGTACTGACCCTCTGTTTCACACTCCTGTTGTCTACACTGGTTCAAGggttttCAATGCTTGTGAATAAACAGTACTGCCTCTGTTCTGGAAAGGGAATTTCGCAATTCTCGTCAAGGCAAATTAAGAAGATAGACGTCTTCCCGCAATCTGCCCGATGTGGAAAGGTGGAAATAATtgcaacttttaaaaacaagaaacgcaaatgtttaaatattcagtCAGAGTGGGTCCTGAAAACGCTGGAAAGGGTTTTTAAGAAAAAGTGATCAGTTTCTCTTCTAAGGTTCAAATCAAAGGATCAAGACAACTAATctccaaaaatatgtatttttgtaccaAATATTTGAATTCCTATGCAAAACTGTATTAAACTGCACTTATAactaaatataacatttgtattttgttacctgttttattaatatattacatattctAGTGTACTTTTAAGGAATGGACTGGAATGACAAACTGTCCTTTGAATAATGGGGAGGAACATtacacaatatgtatatatgtttgttttttaaagactgtATTCTGTTTTAGCTGttgtattccttttaaaattgtaaagtGCTTTGCAATTATTACATGAAAGATattgtatgaaataaaattgatattcatcaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97785 True 715 lncRNA 0.33 4 17226891 17228845

Neighbor

gene id symbol gene type direction distance location
AMCG00010163 NA coding upstream 33541 17187429 ~ 17193350 (+)
AMCG00010153 NA coding upstream 452176 16769582 ~ 16774715 (+)
AMCG00010154 NA coding upstream 465133 16757802 ~ 16761758 (+)
AMCG00010151 NA coding upstream 494612 16722444 ~ 16732279 (+)
AMCG00010145 NA coding upstream 772435 16420684 ~ 16454456 (+)
AMCG00010168 NA coding downstream 22402 17251247 ~ 17261003 (+)
AMCG00010162 NA coding downstream 65222 17294067 ~ 17303416 (+)
AMCG00010161 NA coding downstream 76135 17304980 ~ 17311881 (+)
AMCG00010167 NA coding downstream 86700 17315545 ~ 17317008 (+)
AMCG00010166 NA coding downstream 88328 17317173 ~ 17334410 (+)
G78334 NA non-coding upstream 163979 17054873 ~ 17062912 (+)
G78316 NA non-coding upstream 334291 16892229 ~ 16892600 (+)
G78303 NA non-coding upstream 537019 16688785 ~ 16689872 (+)
G78302 NA non-coding upstream 543717 16682917 ~ 16683174 (+)
G78300 NA non-coding upstream 552272 16674109 ~ 16674619 (+)
G78385 NA non-coding downstream 10205 17239050 ~ 17241485 (+)
G78392 NA non-coding downstream 26377 17255222 ~ 17255429 (+)
G78529 NA non-coding downstream 291422 17520267 ~ 17520854 (+)
G78546 NA non-coding downstream 565595 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 747329 17976174 ~ 17977305 (+)
AMCG00010164 NA other upstream 1551 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 679271 16465564 ~ 16547620 (+)
G78198 NA other upstream 1166804 16057531 ~ 16060087 (+)
AMCG00010119 NA other upstream 1584050 15628345 ~ 15642841 (+)
AMCG00010116 LOC104924827,LOC102229495,LOC106923526,LOC105930787,LOC102305543 other upstream 1692804 15524446 ~ 15534087 (+)
AMCG00010160 NA other downstream 16740 17245585 ~ 17247150 (+)
G78396 NA other downstream 45542 17274387 ~ 17277998 (+)
G78410 NA other downstream 115574 17344419 ~ 17353488 (+)
G78743 NA other downstream 1691066 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1858484 19087329 ~ 19087754 (+)

Expression


Co-expression Network