G78396


Basic Information

Item Value
gene id G78396
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17274387 ~ 17277998 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97800
aaaagaagaagagattaataacaaacaagttCATGAGCACATGGAACAGAAGGggcagctgaaaaaaaaagcaaatgcaggctttaaataaaatttcACCTACGTTATGCTTTGATTGGGTGATACAAATTTTCCTATGATGTAAAGTGatgattcagatttttttggGCCCATTCTTCCCCTATTTGAGCCTATAAATCTCCAGGTTGTGCATGCATGTCTGTCACATCTCTGATAAGACAGAAGTTACCATCGCAGCCTCCTCCACAAAGACTTGACAAGATGACTGCTGTGAGAACCTTCCTGCTGGCTACCCTTGTGGTCTGCTGTATTGCATCAAGCGATGCCTTTTTCGAAGCACTTTCAATGAAGTGTCAGTGCCTGAAATATACCCCTAAGCCTATCAACCCAAGGGAATTTCACCACATTGAAATCATTCCCCAAGGGCCCCGGTGTCGTCAGGTTGAGATCATAATCACCttgaaaaatggaaataaagtcTGTGTTTCTCCTGATGCCATTTGGATCAAAAGTATCATTCAGTTCATCGTGAACAGcAAGAAAAACCAACATTAGGCAAATGGCCAACGACACAAGTGAAGCTGATAAACGGAAAATGGGTTTACATTAATTGATTCTGTGAACATACCTATTGTGCTTTATTGTAATGGACTTGTACACTATCTGCATTGCTGTGCATCCAGTCCTTCTGTGATGAATacaactgacatttaaaagctAACATACCATGGTGCTTCAGAACCATGTGAATTATGaactatgtttttattttataagctcAAGGAAACAATGTTTATTCTCATACAGGATGGGATTTGCCTTTAAATagaaagacattaacatttaaactgGGCATTATAACATAGTTAAATTGagtgcaatacaaataataaataaaaggcagatAACATAGTGGTATAACCAAGTTCGCATTGCTTGTTTGCCATTATTTAGAaggtaaaatgtttaattatttcattgaaTTGGCAATATTCAAATCCCATCCTGTCTTAAAATGTCCAAGTGACAGTGGACTTATGTGGTCAGTTATACAGGCTAGCTATACTGTGAAAAAAGTGAGTTGTGCAAGAATGTTTTTGTACAAtataactttaatttgcattgtcaagtgtataataaatgtattctacaTTTACTTATACATCCATATAGTCCTAagaatttttaaaatctgtgaaatacaaaaataggataaaagcattttttacTTTATGAATTAGCCATGATCTCATAGATGTAGGTATTTGAAGTAAACAGGATGTGTACAACTGTTAGACTcactttgattaattaaattgtattatttttttcttaatgaggTATCTGCTGGTTTTCTGTCTCTGTATAAAACAGtgtgctgtctgtctgcaaaACTTGCATATAACAATAAACATACAGGCAAAGGCCTGTGTAACTTTCAAAGT

Function

GO: NA

KEGG:

id description
ko03010 Ribosome
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
TU97800 True 1466 TUCP 0.35 4 17274387 17277998

Neighbor

gene id symbol gene type direction distance location
AMCG00010168 NA coding upstream 13384 17251247 ~ 17261003 (+)
AMCG00010163 NA coding upstream 81037 17187429 ~ 17193350 (+)
AMCG00010153 NA coding upstream 499672 16769582 ~ 16774715 (+)
AMCG00010154 NA coding upstream 512629 16757802 ~ 16761758 (+)
AMCG00010151 NA coding upstream 542108 16722444 ~ 16732279 (+)
AMCG00010162 NA coding downstream 16069 17294067 ~ 17303416 (+)
AMCG00010161 NA coding downstream 26982 17304980 ~ 17311881 (+)
AMCG00010167 NA coding downstream 37547 17315545 ~ 17317008 (+)
AMCG00010166 NA coding downstream 39175 17317173 ~ 17334410 (+)
AMCG00010165 NA coding downstream 85173 17363171 ~ 17376938 (+)
G78392 NA non-coding upstream 18958 17255222 ~ 17255429 (+)
G78385 NA non-coding upstream 32902 17239050 ~ 17241485 (+)
G78381 NA non-coding upstream 45542 17226891 ~ 17228845 (+)
G78334 NA non-coding upstream 211475 17054873 ~ 17062912 (+)
G78316 NA non-coding upstream 381787 16892229 ~ 16892600 (+)
G78529 NA non-coding downstream 242269 17520267 ~ 17520854 (+)
G78546 NA non-coding downstream 516442 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 698176 17976174 ~ 17977305 (+)
G78635 NA non-coding downstream 780721 18058719 ~ 18077267 (+)
G78682 NA non-coding downstream 1172492 18450490 ~ 18450809 (+)
AMCG00010160 NA other upstream 27237 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 49047 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 726767 16465564 ~ 16547620 (+)
G78198 NA other upstream 1214300 16057531 ~ 16060087 (+)
AMCG00010119 NA other upstream 1631546 15628345 ~ 15642841 (+)
G78410 NA other downstream 66421 17344419 ~ 17353488 (+)
G78743 NA other downstream 1641913 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1809331 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1860005 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 2326620 19604618 ~ 19629439 (+)

Expression


Co-expression Network