G78410


Basic Information

Item Value
gene id G78410
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 17344419 ~ 17353488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU97819
CTTTAGTCGAGGTATATGTATTCCATATattcattacaaaattaaatcaaggaGATTTTTATGTGCGTTTATTGTCCTTCATTGTATTGATATAAGGAGTATGCGGCCACaacaaatatttccaaaaatacatatactttaTTAGGTAGGCTACACCAGCCTGTATTATTgtgcaatgttttatataatcaactttttctaaataataccaaaatgttaaaatatcgACTCATGACTACCATAATACAAGTCATATTTTTCCTTGGCCTACACATTCATATAGTGAGCAATATATTACTTTATTCTGTTTCAATAAGCATGGCAGCATCCTTTCAGTTCATATCTATTTTGATACCATTATTTTAAGGTAACTGCAAAAGACTTTCATGTACTTAAAATATTCAACCTCATATAGTATTTAAAACCCaggattaaataataataataataataataataataataataataataataataataataatgttgttctATATGGTAAAAAATGACCGAGGCATTGCATAAACTGGGATTTTCCTTAACCACATGCACAGGGACAGTCAGGCTTCCAATCCCAAACACTGGAAAACGATCCAAGACCACTGTGGCCAACAGCACACAATCTTGCATGTCTGTCTCAACAAGGTTATGGTACAGACTACACTTTACCACCTCGTCAATACCCGTATGAACACGTTCTCCGTGTTATAAAAGCAAACCGCATCTGAATCAACAGATCCATAGATGCGTTACAGCTTTCAGTCTGACTTTCTAACATGCCTCAAGTCTTCCCAAAGTCATGGAGGGCTCAGATGTATTGCACTGGTTTCCTCTCTCGCATGGTTCACAGGTCGGCGTCAGCGGGATGATTGCGGACAACGTGGGGTCTGTTCATTTTCTTGGGGGCCCGGAAATCTCCGTCGTCCAGGGAGTCCCTTCTGTAGGGGACACTGCTGTCCGACCGGGTGGTTATGCTGGCGATGTCGATGGGCGGCCTGCTCCTCACCCGGTGGTTGTTGGCTTTCGGCGCCGGTTCCGCGGGGATACGAGGAGACCACGTGTTCATGGTGTCGCCCTCCTCCCACTTCCGGCAACATGGAAACAACCAGATGACCAACGCGGCGCCGGCCAAGATCTCCATGATGGCGCCAATGTAGCCCAGGATAAGGCAGTAACCNNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97819 True 1183 TUCP 0.42 2 17344419 17353488

Neighbor

gene id symbol gene type direction distance location
AMCG00010166 NA coding upstream 10009 17317173 ~ 17334410 (+)
AMCG00010167 NA coding upstream 27411 17315545 ~ 17317008 (+)
AMCG00010161 NA coding upstream 32538 17304980 ~ 17311881 (+)
AMCG00010162 NA coding upstream 41003 17294067 ~ 17303416 (+)
AMCG00010168 NA coding upstream 83416 17251247 ~ 17261003 (+)
AMCG00010165 NA coding downstream 9683 17363171 ~ 17376938 (+)
AMCG00010174 ak6,zgc:86811,LOC107592327 coding downstream 50067 17403555 ~ 17406905 (+)
AMCG00010173 NA coding downstream 55576 17409064 ~ 17418206 (+)
AMCG00010175 NA coding downstream 66125 17419613 ~ 17431129 (+)
AMCG00010177 gtf2h2c,LOC100196672,LOC103032811 coding downstream 80953 17434441 ~ 17440347 (+)
G78392 NA non-coding upstream 88990 17255222 ~ 17255429 (+)
G78385 NA non-coding upstream 102934 17239050 ~ 17241485 (+)
G78381 NA non-coding upstream 115574 17226891 ~ 17228845 (+)
G78334 NA non-coding upstream 281507 17054873 ~ 17062912 (+)
G78316 NA non-coding upstream 451819 16892229 ~ 16892600 (+)
G78529 NA non-coding downstream 166779 17520267 ~ 17520854 (+)
G78546 NA non-coding downstream 440952 17794440 ~ 17845546 (+)
G78607 NA non-coding downstream 622686 17976174 ~ 17977305 (+)
G78635 NA non-coding downstream 705231 18058719 ~ 18077267 (+)
G78682 NA non-coding downstream 1097002 18450490 ~ 18450809 (+)
G78396 NA other upstream 66421 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 97269 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 119079 17220036 ~ 17225340 (+)
AMCG00010144 adamts3,LOC103134868 other upstream 796799 16465564 ~ 16547620 (+)
G78198 NA other upstream 1284332 16057531 ~ 16060087 (+)
G78743 NA other downstream 1566423 18919911 ~ 18921444 (+)
G78794 LOC107575789 other downstream 1733841 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 1784515 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 2251130 19604618 ~ 19629439 (+)
G79382 NA other downstream 4692630 22046118 ~ 22047542 (+)

Expression


Co-expression Network