G78758


Basic Information

Item Value
gene id G78758
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 18963523 ~ 18963725 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98243
CAGCAAGTCATACAGCTGCCCGCAGTAAATCTCGAAGAAGCTGATGCAGACGTGCAGCGCGGGGCGGCCGGGTGCCAACTCCCCCAGCTGCTTGAAGATGTCGCGGGCGGCCAGCGCATACAGGCCGGGGCTCCGTGCCGTTCCCATCATGGTGTGTGTCTTCCCTGCGCCCGTCTGCCCGTATGCGAAGCACGTGGCTTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98243 True 203 lncRNA 0.64 1 18963523 18963725

Neighbor

gene id symbol gene type direction distance location
AMCG00010202 nop56,LOC107661748,LOC107739720 coding upstream 81732 18874762 ~ 18881791 (+)
AMCG00010203 NA coding upstream 97032 18851157 ~ 18866491 (+)
AMCG00010204 celf4 coding upstream 157705 18776456 ~ 18805818 (+)
AMCG00010201 celf4,LOC103139612,LOC106958278 coding upstream 278883 18678221 ~ 18684640 (+)
AMCG00010198 LOC107675632,LOC107736863,LOC107584535,LOC107661672,LOC107739687,LOC108437682 coding upstream 745150 18214015 ~ 18218373 (+)
AMCG00010212 NA coding downstream 107202 19070927 ~ 19080716 (+)
AMCG00010213 NA coding downstream 139143 19102868 ~ 19108097 (+)
AMCG00010214 NA coding downstream 153010 19116735 ~ 19119081 (+)
AMCG00010218 NA coding downstream 226157 19189882 ~ 19229691 (+)
AMCG00010217 NA coding downstream 266137 19229862 ~ 19245933 (+)
G78682 NA non-coding upstream 512714 18450490 ~ 18450809 (+)
G78635 NA non-coding upstream 886256 18058719 ~ 18077267 (+)
G78607 NA non-coding upstream 986218 17976174 ~ 17977305 (+)
G78546 NA non-coding upstream 1117977 17794440 ~ 17845546 (+)
G78529 NA non-coding upstream 1442669 17520267 ~ 17520854 (+)
G78760 NA non-coding downstream 7570 18971295 ~ 18971714 (+)
G78772 NA non-coding downstream 42564 19006289 ~ 19010099 (+)
G78774 NA non-coding downstream 49677 19013402 ~ 19013758 (+)
G78939 NA non-coding downstream 526932 19490657 ~ 19494085 (+)
G79081 NA non-coding downstream 1318634 20282359 ~ 20282722 (+)
G78743 NA other upstream 42079 18919911 ~ 18921444 (+)
G78410 NA other upstream 1610035 17344419 ~ 17353488 (+)
G78396 NA other upstream 1685525 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 1716373 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 1738183 17220036 ~ 17225340 (+)
G78794 LOC107575789 other downstream 123604 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 174278 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 640893 19604618 ~ 19629439 (+)
G79382 NA other downstream 3082393 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 3394244 22357969 ~ 22378809 (+)

Expression


Co-expression Network