G78760


Basic Information

Item Value
gene id G78760
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 18971295 ~ 18971714 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98245
TTGACATGCAGTATGAAAGGAGGTTGTTAAGTCATGATGCTTAAAGACACAAGTCACTATGATGGataaatattgcatatattgtattttcaggTGTGGGCATTCatcctgttttaattttattttgaaagcagaaGAATCATTCAACAGGCTGCTGAGAGAAATGTAAACCAGTAaaatacatgaagaaaaacaaaccttgaatATAAGTGCAgttgtttaaacatttgaaaaactataGTGAGGGggtaagaaaacacacaaatccaGCAGCTCTTGTATTTCAGTGCACCAGAACCCAATATTATTGGCGAGTCGGGTAGTCCATCATCAAACAATTCAAGCAAGTTTAAcgtttaaaaacatttccatgacaaatattaaaatcttgTGCTAAAACTATGAAATGCTAGACTGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98245 True 420 lncRNA 0.34 1 18971295 18971714

Neighbor

gene id symbol gene type direction distance location
AMCG00010202 nop56,LOC107661748,LOC107739720 coding upstream 89504 18874762 ~ 18881791 (+)
AMCG00010203 NA coding upstream 104804 18851157 ~ 18866491 (+)
AMCG00010204 celf4 coding upstream 165477 18776456 ~ 18805818 (+)
AMCG00010201 celf4,LOC103139612,LOC106958278 coding upstream 286655 18678221 ~ 18684640 (+)
AMCG00010198 LOC107675632,LOC107736863,LOC107584535,LOC107661672,LOC107739687,LOC108437682 coding upstream 752922 18214015 ~ 18218373 (+)
AMCG00010212 NA coding downstream 99213 19070927 ~ 19080716 (+)
AMCG00010213 NA coding downstream 131154 19102868 ~ 19108097 (+)
AMCG00010214 NA coding downstream 145021 19116735 ~ 19119081 (+)
AMCG00010218 NA coding downstream 218168 19189882 ~ 19229691 (+)
AMCG00010217 NA coding downstream 258148 19229862 ~ 19245933 (+)
G78758 NA non-coding upstream 7570 18963523 ~ 18963725 (+)
G78682 NA non-coding upstream 520486 18450490 ~ 18450809 (+)
G78635 NA non-coding upstream 894028 18058719 ~ 18077267 (+)
G78607 NA non-coding upstream 993990 17976174 ~ 17977305 (+)
G78546 NA non-coding upstream 1125749 17794440 ~ 17845546 (+)
G78772 NA non-coding downstream 34575 19006289 ~ 19010099 (+)
G78774 NA non-coding downstream 41688 19013402 ~ 19013758 (+)
G78939 NA non-coding downstream 518943 19490657 ~ 19494085 (+)
G79081 NA non-coding downstream 1310645 20282359 ~ 20282722 (+)
G79091 NA non-coding downstream 1495595 20467309 ~ 20467696 (+)
G78743 NA other upstream 49851 18919911 ~ 18921444 (+)
G78410 NA other upstream 1617807 17344419 ~ 17353488 (+)
G78396 NA other upstream 1693297 17274387 ~ 17277998 (+)
AMCG00010160 NA other upstream 1724145 17245585 ~ 17247150 (+)
AMCG00010164 NA other upstream 1745955 17220036 ~ 17225340 (+)
G78794 LOC107575789 other downstream 115615 19087329 ~ 19087754 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other downstream 166289 19138003 ~ 19184069 (+)
AMCG00010224 NA other downstream 632904 19604618 ~ 19629439 (+)
G79382 NA other downstream 3074404 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 3386255 22357969 ~ 22378809 (+)

Expression


Co-expression Network