G79081


Basic Information

Item Value
gene id G79081
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 20282359 ~ 20282722 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98631
aaaggagaaaataaaacataaaaatactattagaatgagttttacaaaccagaaataaaaaaataaaatgttgaaaattgaattagagctaatttttgaaatgggaatctgaggaaacagtGAAATTTGGTGAagatatgaatacatagataaccagatactccaggaaattaaaggtgtggtcatttggtagctgtgagttccacaatgaagagtttttgaAATCCCCAGATATAAGATCCCTAAATACATTGTGTAGGTAAGAAAGtaactattgatcagttcaatctggctttgggaacagttcttctgaacctgtaccggtgtagattggacttcaataggaggaagtgacacaataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98631 True 364 lncRNA 0.33 1 20282359 20282722

Neighbor

gene id symbol gene type direction distance location
AMCG00010235 NA coding upstream 79419 20193944 ~ 20202940 (+)
AMCG00010236 NA coding upstream 142081 20061249 ~ 20140278 (+)
AMCG00010231 NA coding upstream 263432 20006224 ~ 20018927 (+)
AMCG00010227 mapk10,LOC107749009,LOC107719076,LOC107662288 coding upstream 526281 19731874 ~ 19756078 (+)
AMCG00010228 mapk10,LOC107719076,LOC107749009 coding upstream 560796 19711327 ~ 19721563 (+)
AMCG00010238 NA coding downstream 227942 20510664 ~ 20511173 (+)
AMCG00010237 NA coding downstream 228554 20511276 ~ 20511602 (+)
AMCG00010244 ccbe1,LOC107662219,LOC107719070,LOC107600894,LOC107701959,LOC107739739 coding downstream 565049 20847771 ~ 20874164 (+)
AMCG00010243 LOC106562978 coding downstream 615728 20898450 ~ 20924670 (+)
AMCG00010245 NA coding downstream 648609 20931331 ~ 20940964 (+)
G78939 NA non-coding upstream 788274 19490657 ~ 19494085 (+)
G78774 NA non-coding upstream 1268601 19013402 ~ 19013758 (+)
G78772 NA non-coding upstream 1272260 19006289 ~ 19010099 (+)
G78760 NA non-coding upstream 1310645 18971295 ~ 18971714 (+)
G78758 NA non-coding upstream 1318634 18963523 ~ 18963725 (+)
G79091 NA non-coding downstream 184587 20467309 ~ 20467696 (+)
G79109 NA non-coding downstream 348490 20631212 ~ 20631454 (+)
G79113 NA non-coding downstream 374627 20657349 ~ 20657834 (+)
G79118 NA non-coding downstream 487277 20769999 ~ 20773081 (+)
G79157 NA non-coding downstream 705438 20988160 ~ 21000012 (+)
AMCG00010224 NA other upstream 652920 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 1098290 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 1194605 19087329 ~ 19087754 (+)
G78743 NA other upstream 1360915 18919911 ~ 18921444 (+)
G78410 NA other upstream 2928871 17344419 ~ 17353488 (+)
G79382 NA other downstream 1763396 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 2075247 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 2417020 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 3033293 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 3638038 23920760 ~ 24009853 (+)

Expression


Co-expression Network