G79109


Basic Information

Item Value
gene id G79109
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 20631212 ~ 20631454 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98660
aattcaatgtggacaagtgcaaggtattacatgcaggtaacaaaaatgtccactataattacactatgggaggaatagaactagatgaagtaacgcatgagaaagacctaggagtctatgtggactcctcactttctccatccaagcaatgtggggaagcaataaaaaaaggcaaacagaatgttagggtatattgtcaaaagtgtagaattgagaacaagggcagtaatgttcagactgtac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98660 True 243 lncRNA 0.39 1 20631212 20631454

Neighbor

gene id symbol gene type direction distance location
AMCG00010237 NA coding upstream 119610 20511276 ~ 20511602 (+)
AMCG00010238 NA coding upstream 120039 20510664 ~ 20511173 (+)
AMCG00010235 NA coding upstream 428272 20193944 ~ 20202940 (+)
AMCG00010236 NA coding upstream 490934 20061249 ~ 20140278 (+)
AMCG00010231 NA coding upstream 612285 20006224 ~ 20018927 (+)
AMCG00010244 ccbe1,LOC107662219,LOC107719070,LOC107600894,LOC107701959,LOC107739739 coding downstream 216317 20847771 ~ 20874164 (+)
AMCG00010243 LOC106562978 coding downstream 266996 20898450 ~ 20924670 (+)
AMCG00010245 NA coding downstream 299877 20931331 ~ 20940964 (+)
AMCG00010249 NA coding downstream 324927 20956381 ~ 20960556 (+)
AMCG00010251 NA coding downstream 372835 21004289 ~ 21022701 (+)
G79091 NA non-coding upstream 163516 20467309 ~ 20467696 (+)
G79081 NA non-coding upstream 348490 20282359 ~ 20282722 (+)
G78939 NA non-coding upstream 1137127 19490657 ~ 19494085 (+)
G78774 NA non-coding upstream 1617454 19013402 ~ 19013758 (+)
G78772 NA non-coding upstream 1621113 19006289 ~ 19010099 (+)
G79113 NA non-coding downstream 25895 20657349 ~ 20657834 (+)
G79118 NA non-coding downstream 138545 20769999 ~ 20773081 (+)
G79157 NA non-coding downstream 356706 20988160 ~ 21000012 (+)
G79178 NA non-coding downstream 419362 21050816 ~ 21052576 (+)
G79190 NA non-coding downstream 442082 21073536 ~ 21074074 (+)
AMCG00010224 NA other upstream 1001773 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 1447143 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 1543458 19087329 ~ 19087754 (+)
G78743 NA other upstream 1709768 18919911 ~ 18921444 (+)
G78410 NA other upstream 3277724 17344419 ~ 17353488 (+)
G79382 NA other downstream 1414664 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 1726515 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 2068288 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 2684561 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 3289306 23920760 ~ 24009853 (+)

Expression


Co-expression Network