G79259


Basic Information

Item Value
gene id G79259
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 21531677 ~ 21532597 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98849
AGTTTTGTATCTCttaatataatcattttaatcataattgttattataacaAGGAATAACAGCTGTTGTTACAGTGGAACCAACAATCTTTATTTTGAAGAGACCAAATTTTTAAGCAGTACTTGTAAATgacattcaaattattattctaCAGTTTTGGTGCCTTTTATATCGGGTTATGTTACATtgacaaaaacactttaaagtgAGTGTTGCAGGCAAGGCAGTTTTGTCAGATATAACAAAGCGTCTTGAAACAAAGATCTGAAAGTCTTTTTGTCAGTTATTTCTATGTTCCAATTGGACTGACTTTAAGCAAACCAGTAGCTAATGCTGGTCTGAAGAAAAAAACTCTACAATTTGGCTAACAATTTTATCCAACCCAGCTGTCATCTAACAAAATAGTTGCATATggtagggaaaaaaaagcattgctaAGGAGATAAAGATAGTGGAGAACACAGCATAATGCAAATTACAGCACATGAACAAAGTAGGCAAAGGTTTGCAATACAATAAGCTTGAATTGCATGAAGCATGGAGTAGAATTAAGATTGAATTGAAGGACCTGTTTTTGATAATCTGTGAATGCATTTCTGTCCAATCATAAACCTTTGTTGTTTGGGAGATTGAGTgatataatataaacacaaaatacaaatctctgATGGTTGTGAAAGCTTCAActataaaacactgatttagtaattaaaattaaataaaccagttTAACTAGATATTGTAGCATATagtaattaagtatttaatataaataacaccactgtatatataaaataacttcaTATAATAgggattaaattatttaaatatttaaaacatattttctttgttttgatattCAAAATCaactaaagttttttttcaaGGTACAGTATTAGTACACAACTAAGTTATAGGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98849 True 921 lncRNA 0.29 1 21531677 21532597

Neighbor

gene id symbol gene type direction distance location
AMCG00010257 LOC103368378 coding upstream 1359 21529623 ~ 21530318 (+)
AMCG00010250 NA coding upstream 108777 21405183 ~ 21422900 (+)
AMCG00010252 NA coding upstream 426584 21081237 ~ 21105093 (+)
AMCG00010256 NA coding upstream 484200 21028778 ~ 21047477 (+)
AMCG00010251 NA coding upstream 508976 21004289 ~ 21022701 (+)
AMCG00010253 NA coding downstream 100808 21633405 ~ 21656223 (+)
AMCG00010255 rad1,LOC107718285,LOC107585563,LOC107743754 coding downstream 202574 21735171 ~ 21740568 (+)
AMCG00010254 brix1 coding downstream 208177 21740774 ~ 21746219 (+)
AMCG00010259 NA coding downstream 214444 21747041 ~ 21756358 (+)
AMCG00010260 mthfd2l coding downstream 258932 21791529 ~ 21826339 (+)
G79190 NA non-coding upstream 457603 21073536 ~ 21074074 (+)
G79178 NA non-coding upstream 479101 21050816 ~ 21052576 (+)
G79157 NA non-coding upstream 531665 20988160 ~ 21000012 (+)
G79118 NA non-coding upstream 758596 20769999 ~ 20773081 (+)
G79113 NA non-coding upstream 873843 20657349 ~ 20657834 (+)
G79272 cks2,LOC107675750,LOC107653382 non-coding downstream 96561 21629158 ~ 21632876 (+)
G79355 NA non-coding downstream 469746 22002343 ~ 22002665 (+)
G79357 NA non-coding downstream 474794 22007391 ~ 22010144 (+)
G79380 NA non-coding downstream 512036 22044633 ~ 22045794 (+)
G79394 NA non-coding downstream 536826 22069423 ~ 22071493 (+)
AMCG00010224 NA other upstream 1902238 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 2347608 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 2443923 19087329 ~ 19087754 (+)
G78743 NA other upstream 2610233 18919911 ~ 18921444 (+)
G78410 NA other upstream 4178189 17344419 ~ 17353488 (+)
G79382 NA other downstream 513521 22046118 ~ 22047542 (+)
G79420 rpl17,LOC107579731 other downstream 825372 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 1167145 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 1783418 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 2388163 23920760 ~ 24009853 (+)

Expression


Co-expression Network