G79382


Basic Information

Item Value
gene id G79382
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22046118 ~ 22047542 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU98991
CTAATTGGTACCTGCTGCCTCAACACAATCAATTCTGCAACCTTTATGTAACTATACACtacacattgtgtgtgtgtgtaacttgTTCAATGCAGGTAAGCTGAATGCCGCTCACATGATGTCGGGACGGTCAGAGCAAACGGCAGACTGGAAAATACCTCTATGACTAGCACTAGTATATCTGCTTCCTCGCTTCTTCTGTTTCATTTAGCAATGTTGACGTAGCGTGTAGTTGCTTTAAGGAAATGGCGAGGCTGCGCTTTTGGACGAGACCGTCTGATCATAATTCACGAAGAacatcttaaaaagaaagatcacTGTATCCCATTAAGCCGGATTTGTCGATAGAAAGCGCATTGGGAACAAACGTGTGGCGGCTGTAGTAACATGCGGACAGGGGCAGCCTTCGCCCTCCTCTTGCTGGGACTGTGTTGCCGTGCAGACGCCGGCTCTGAGCGCCCCCAGCCCGCAGGAGCTGCCTTTATCGCCGCAGATCTGCTGCAGGCTGTCGGCACCGTGAACCAGGGCTTCCTGTCTGTGGCGATAGATGCCAGCTTAGTTGCAGAAGAGAAATATGTGTATCTTTTGGGCTCCCAGAAGCTTAGAACCCTCTCGAAAGCCCTGTCCCCTGGGTTTTTGAGATTTGGTGGAACAAAGGCAGACTTCATGATCTTTGCCCCTCGAAATGACTCCGTAACACAAAGGGATTTCCTGAGAGACTCTGCATTTCAGCCAGG

Function

GO:

id name namespace
GO:0043167 ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98991 True 737 TUCP 0.50 2 22046118 22047542

Neighbor

gene id symbol gene type direction distance location
AMCG00010266 myl5 coding upstream 25160 22017684 ~ 22020958 (+)
AMCG00010261 NA coding upstream 159980 21880507 ~ 21886138 (+)
AMCG00010258 NA coding upstream 205215 21831125 ~ 21840903 (+)
AMCG00010260 mthfd2l coding upstream 219779 21791529 ~ 21826339 (+)
AMCG00010259 NA coding upstream 289760 21747041 ~ 21756358 (+)
AMCG00010272 NA coding downstream 31746 22079288 ~ 22096930 (+)
AMCG00010278 tnksa,tnks,LOC107706493,LOC107567652,LOC107591704,LOC108279024,LOC107667582 coding downstream 482588 22530130 ~ 22541832 (+)
AMCG00010279 tnksa,LOC108436993,LOC108279024,LOC107706493,LOC107681059 coding downstream 603487 22651029 ~ 22694955 (+)
AMCG00010281 LOC108436681,LOC105014741,LOC106568256 coding downstream 848378 22895920 ~ 22917724 (+)
AMCG00010283 idua coding downstream 957702 23005244 ~ 23044243 (+)
G79380 NA non-coding upstream 324 22044633 ~ 22045794 (+)
G79357 NA non-coding upstream 35974 22007391 ~ 22010144 (+)
G79355 NA non-coding upstream 43453 22002343 ~ 22002665 (+)
G79272 cks2,LOC107675750,LOC107653382 non-coding upstream 413242 21629158 ~ 21632876 (+)
G79259 NA non-coding upstream 513521 21531677 ~ 21532597 (+)
G79394 NA non-coding downstream 21881 22069423 ~ 22071493 (+)
G79414 NA non-coding downstream 187473 22235015 ~ 22235264 (+)
G79415 NA non-coding downstream 202089 22249631 ~ 22249832 (+)
G79427 NA non-coding downstream 332221 22379763 ~ 22384132 (+)
G79443 NA non-coding downstream 427895 22475437 ~ 22475983 (+)
AMCG00010224 NA other upstream 2416679 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 2862049 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 2958364 19087329 ~ 19087754 (+)
G78743 NA other upstream 3124674 18919911 ~ 18921444 (+)
G78410 NA other upstream 4692630 17344419 ~ 17353488 (+)
G79420 rpl17,LOC107579731 other downstream 310427 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 652200 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 1268473 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 1873218 23920760 ~ 24009853 (+)
AMCG00010333 NA other downstream 2785529 24833071 ~ 24837552 (+)

Expression


Co-expression Network