G79415


Basic Information

Item Value
gene id G79415
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 22249631 ~ 22249832 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU99027
gactgtacaatgcactagttagagctcatctggatactgtgtacagttctgggctccacacttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaaagtcctactgagagactgagggaactgaaccttttcaccctggaacagaggagactatgtggggactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99027 True 202 lncRNA 0.48 1 22249631 22249832

Neighbor

gene id symbol gene type direction distance location
AMCG00010272 NA coding upstream 152701 22079288 ~ 22096930 (+)
AMCG00010266 myl5 coding upstream 228673 22017684 ~ 22020958 (+)
AMCG00010261 NA coding upstream 363493 21880507 ~ 21886138 (+)
AMCG00010258 NA coding upstream 408728 21831125 ~ 21840903 (+)
AMCG00010260 mthfd2l coding upstream 423292 21791529 ~ 21826339 (+)
AMCG00010278 tnksa,tnks,LOC107706493,LOC107567652,LOC107591704,LOC108279024,LOC107667582 coding downstream 280298 22530130 ~ 22541832 (+)
AMCG00010279 tnksa,LOC108436993,LOC108279024,LOC107706493,LOC107681059 coding downstream 401197 22651029 ~ 22694955 (+)
AMCG00010281 LOC108436681,LOC105014741,LOC106568256 coding downstream 646088 22895920 ~ 22917724 (+)
AMCG00010283 idua coding downstream 755412 23005244 ~ 23044243 (+)
AMCG00010282 pde6b,LOC108436964,LOC108232538,LOC107706500,LOC103473654 coding downstream 807788 23057620 ~ 23076233 (+)
G79414 NA non-coding upstream 14367 22235015 ~ 22235264 (+)
G79394 NA non-coding upstream 178138 22069423 ~ 22071493 (+)
G79380 NA non-coding upstream 203837 22044633 ~ 22045794 (+)
G79357 NA non-coding upstream 239487 22007391 ~ 22010144 (+)
G79355 NA non-coding upstream 246966 22002343 ~ 22002665 (+)
G79427 NA non-coding downstream 129931 22379763 ~ 22384132 (+)
G79443 NA non-coding downstream 225605 22475437 ~ 22475983 (+)
G79476 dusp4,LOC107703586,LOC107708543,LOC107591703,LOC107589246 non-coding downstream 454957 22704789 ~ 22705108 (+)
G79508 NA non-coding downstream 838265 23088097 ~ 23088362 (+)
G79509 NA non-coding downstream 846759 23096591 ~ 23096838 (+)
G79382 NA other upstream 202089 22046118 ~ 22047542 (+)
AMCG00010224 NA other upstream 2620192 19604618 ~ 19629439 (+)
AMCG00010216 LOC105937265,LOC103469946,LOC102230010,LOC106933859,LOC108233764,LOC105014676 other upstream 3065562 19138003 ~ 19184069 (+)
G78794 LOC107575789 other upstream 3161877 19087329 ~ 19087754 (+)
G78743 NA other upstream 3328187 18919911 ~ 18921444 (+)
G79420 rpl17,LOC107579731 other downstream 108137 22357969 ~ 22378809 (+)
G79475 dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 other downstream 449910 22699742 ~ 22703409 (+)
AMCG00010292 rchy1 other downstream 1066183 23316015 ~ 23329546 (+)
AMCG00010320 LOC104946060 other downstream 1670928 23920760 ~ 24009853 (+)
AMCG00010333 NA other downstream 2583239 24833071 ~ 24837552 (+)

Expression


Co-expression Network