Gene
RNA
| Item | Value |
|---|---|
| gene id | G79752 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 23851026 ~ 23853436 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| ko04080 | Neuroactive ligand-receptor interaction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU99467 | True | 430 | lncRNA | 0.44 | 2 | 23851026 | 23853436 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010313 | NA | coding | upstream | 14558 | 23812550 ~ 23836468 (+) |
| AMCG00010315 | shroom3 | coding | upstream | 64672 | 23774521 ~ 23786354 (+) |
| AMCG00010310 | NA | coding | upstream | 119311 | 23724391 ~ 23731715 (+) |
| AMCG00010301 | NA | coding | upstream | 223604 | 23597317 ~ 23627422 (+) |
| AMCG00010299 | NA | coding | upstream | 339400 | 23480883 ~ 23511626 (+) |
| AMCG00010314 | NA | coding | downstream | 4244 | 23857680 ~ 23860700 (+) |
| AMCG00010319 | atp8b1 | coding | downstream | 44337 | 23897773 ~ 23917606 (+) |
| AMCG00010321 | wdr7 | coding | downstream | 227857 | 24081293 ~ 24123623 (+) |
| AMCG00010322 | st8sia3,LOC106580045,LOC105014695,LOC106572171,LOC106585377 | coding | downstream | 344040 | 24197476 ~ 24214335 (+) |
| AMCG00010323 | onecut2,LOC106572165 | coding | downstream | 375112 | 24228548 ~ 24229774 (+) |
| G79675 | NA | non-coding | upstream | 152778 | 23688730 ~ 23698248 (+) |
| G79673 | NA | non-coding | upstream | 175069 | 23639053 ~ 23675957 (+) |
| G79660 | NA | non-coding | upstream | 220422 | 23628625 ~ 23630604 (+) |
| G79658 | NA | non-coding | upstream | 317325 | 23530634 ~ 23533701 (+) |
| G79597 | NA | non-coding | upstream | 512820 | 23337972 ~ 23338206 (+) |
| G79820 | fech | non-coding | downstream | 417839 | 24271275 ~ 24275684 (+) |
| G79827 | nars,LOC105905856 | non-coding | downstream | 441952 | 24295388 ~ 24298215 (+) |
| G79829 | nars | non-coding | downstream | 446863 | 24300299 ~ 24301869 (+) |
| G79846 | NA | non-coding | downstream | 747696 | 24601132 ~ 24650632 (+) |
| G79849 | NA | non-coding | downstream | 870398 | 24723834 ~ 24727757 (+) |
| AMCG00010292 | rchy1 | other | upstream | 521480 | 23316015 ~ 23329546 (+) |
| G79475 | dusp4,LOC107703586,LOC107706494,LOC107591703,LOC107708543,LOC107681175,LOC107589246 | other | upstream | 1147617 | 22699742 ~ 22703409 (+) |
| G79420 | rpl17,LOC107579731 | other | upstream | 1472217 | 22357969 ~ 22378809 (+) |
| G79382 | NA | other | upstream | 1803484 | 22046118 ~ 22047542 (+) |
| AMCG00010224 | NA | other | upstream | 4221587 | 19604618 ~ 19629439 (+) |
| AMCG00010320 | LOC104946060 | other | downstream | 67324 | 23920760 ~ 24009853 (+) |
| AMCG00010333 | NA | other | downstream | 979635 | 24833071 ~ 24837552 (+) |
| AMCG00010366 | tal2,LOC106585373,LOC106580046 | other | downstream | 2139122 | 25992558 ~ 25996414 (+) |
| G80014 | NA | other | downstream | 2159048 | 26012484 ~ 26026303 (+) |
| AMCG00010369 | snx30,LOC107569385,LOC106591923 | other | downstream | 2527031 | 26380467 ~ 26403020 (+) |
