AMCG00010788


Basic Information

Item Value
gene id AMCG00010788
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 35149 ~ 38223 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010788
ATGACAGAACCTCGGCAAGAAAAGGTGAAGCCAACTGAGTGGGAAGGAACCTCAGAATATCAAGCAGATTCttccaccacccccaccactaCTGCCAGAAGCACCATGACATCCACCAACAATGCAGCCTCTGTAACGACCGGCACCTCAGTATCCGGCAGCCCCACTGCAACTACAGCTGCCAGCTCAATCACCTCAGTTTCCCCAACTGATGGTGCGCAGATCACAGCCTCATCCAGCCTGTCTCTGGGCTCCCTGCTGTTGCTGGCTGTCTACATCCTCCTGCCCTGAATGGCGACCTGCCTCCCCCCAGACCTCAGAGACTGTCCACAAGCATGGAGGAATGAAGAGATCCTGGAAGATTGGGAATGATTTACAATGAGTTTGTAATCTTTATATCTAAATATAGGCCTTACAGGCCTGcaaaaactgtatatatatatatatatatatatatatatacacactttttgCAGGCCTGTAAGGCACCGGCTAATAAGTAATTAACACAATGAAACAATattcaccttttctttttgtgtcaATAAAATTTCACTTCTGGTGTCTTTCACTTAATAATTATACCAGCCATAGCATCTCGCTTTAGAAAGGCCTGTTTTTAATTAGTCTATCGAACACAGAGTTAAATATTAAGACAGTTAAGATCAAATGAGGGTTATAGCTGCAATAACAATAAGGCATTGTTGTTTCAGGAAGGGCATGTGTGAAATCTGCCTCAATCTCAGTCATGAACTCTTACTTTTGACACGAGGACGACATCCTAAATCATGAGCCAGTATTACCTGGGAAACGCATTTCCAAGTTAAACCAAAAGAACTAACGACCTACTCTGTACACATACAGATGCTGTAAGAATTGAAAGTGTTATTAACCTgctaatataaataaacaaatgctttgGTAATTTA

Function

GO:

id name namespace
GO:0006814 sodium ion transport biological_process

KEGG:

id description
ko04614 Renin-angiotensin system
ko04976 Bile secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010788 True 929 mRNA 0.42 3 35149 38223

Neighbor

gene id symbol gene type direction distance location
AMCG00010789 NA coding upstream 2983 30968 ~ 32166 (+)
AMCG00010800 NA coding downstream 877511 915734 ~ 925202 (+)
AMCG00010801 sf3a3 coding downstream 913300 951523 ~ 957231 (+)
AMCG00010803 NA coding downstream 939026 977249 ~ 1008155 (+)
AMCG00010805 mtf1 coding downstream 974360 1012583 ~ 1028590 (+)
AMCG00010804 NA coding downstream 996461 1034684 ~ 1040844 (+)
G102333 NA non-coding downstream 96845 135068 ~ 135420 (+)
G102340 NA non-coding downstream 107722 145945 ~ 149673 (+)
G102344 NA non-coding downstream 115932 154155 ~ 156740 (+)
G102359 NA non-coding downstream 249168 287391 ~ 287691 (+)
G102361 NA non-coding downstream 249529 287752 ~ 287971 (+)
AMCG00010809 pdik1l,LOC107690927 other downstream 1008179 1046402 ~ 1125186 (+)
G102531 NA other downstream 1751965 1790188 ~ 1791723 (+)
G102535 NA other downstream 1760217 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 1906832 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 2001291 2039514 ~ 2064344 (+)

Expression


Co-expression Network