AMCG00010793


Basic Information

Item Value
gene id AMCG00010793
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 43198 ~ 69595 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010793
ATGAAGGGATgcaagaaagggagagaagggCGGCAGCAGAGCAGAAGGCACAGCCTGAAGGAGAACAGTGTGGAGGGGGGTCCACATGGGGGTCCCTGGAGCAGGCTGAGCTCGGAGTCAGAGATGGCAGAGAAACAGGAGAAGGAGGGTGAGCTCACCAAAGAAAAGGAACATGGGAAGCTAAACCCCCGGCCTGGCAAGATGTACATTTACGATCAGCCGGGTTTCTGTGGGTCGAGGCTGGAGGTGTACAGTGATGTCATCGATGCCACGCCCTGGGAGTTTCCAGAGACAATCTCCATCCGCGTGCTGAGGGGGGGGTGGGTTATGTATGAAAAGCCCAGTTTCAAAGGCGAGAAGTTTGCCCTGGACGAGGGTGACATTGAGCTGACCTCCCCCTTCGGGGGCTCGGAGGGACAGGAAGTGGAGCCAAAGAAGAAGTTTGTGATTGGGTCCCTGCGCAGGGCCGTCAGGGATTACAGTGTCCCTGAGATCAGCCTGTTCCCGGAGGAGAACGCTGAGGGGAAGAAGGTGGTCTTCAGGGACACTTCAGAGGACGCCCGAATTTTTGGATTCCCAATTAAAGCCAACTCCCTCATTGGGGTCCCACGGGTGATCGAGGTGGGGGGCTACTCTAACCTGGAGGCCTGGGGGGCAGCTGAGCCATACGTGGGCTCCCTTCACCCACTGAAAATAGGTGAACCTAAAGTGGAGAAGCCGCATGAGCCCAAGGTTATTATCTACGAGAAGACATACTTCTCAGGGAAGTCTCGCGAGATTTACACCAACACTCTGGATTTCATGACCCGAGTGGATGAGCAGAGCGTCTTCATGTACAGCGTGGGCTCCATCAAAGTGCTGGGCGGCTGCTGGGTGGGCTTTGAAAAGGAGGGCTTCCGGGGGCACCAGTACCTGCTGGAGGAGGGGGATTACCATGACTGGAGAGACCTCTCTGAGCCCCTGATGTTGATGTTCGGGTGCAGCGTCGATGGAGAGGAGGCCGAGCCGTTTGAGGTGATGGAGGCGATTCCAGATGTTGAGCTCTGCGATTTCCAAACTGTGTCACAGTCTATTCACGTGCTCAGCGGAGCGTGGATAGCCTACTCTCACGTGGATTTCTCTGGCGATCAATATATTCTGGAGAAAGGCTTCTATAACAGCTGTCAGGACTGGGGAGCCTGTGACAATAGGATCTGCTCTGTTCAGCCTATACTGCTGgcccCAAGGGAGAATTCGAGCTTGAAGAGTCAGATCCTGCTGTACCCAGAGCCAGAGTTTCGGGGAGATTGCCAGTCTTATGACCAGGAAGAAGGAGCCCTGTCCGACTCCTTCCTGCCCCAGTCCTGCAGGGTGCTGCATGGGAGCTGGGTCGTGTACGAGGGCCGCGATTTCTCTGGGAACCTGTATATGTTCACTGTGCCCTCCATCTCGCTGTTCAGTCTGGAGTGCTTTGAGGGAAGAGAGATCTCCCTGTCCTCCGAGGTGCTGAGTGTGCCGGCAGAGGGCTTCAACACCCACGTCCTGTCTGTGCGGGTCAACGCCGGGATGTGGGTGGTGTGTGAACACGCAAACTACAGAGGGCGCCAGAGGCGGTGGTTCTTCTGCATTAAGAACAAGGAGCGGGGAAACTACATGTCCATCCAGGGAGGGGTGGAGGAGATGAAATCTGGTCGGGTGGTCGCATCGGAGCAAGTGGAGGGAATGAGTCATGTCTGGTACTACGAGGACGGCCTGATCAAGAACAAGCTGGCACCCACTATGAGTCTGCAAGTGATGGGTAATGTGGAGGAAGGTGCCAAGGTGGTGCTGTGGTCTGAGAACAGGATGCCAAGACAGGCCTGGAGCGCTGAACTCAGTGGGCGAATTATCAGCCTGGTCTTCGAGGGTTTGGTGCTCGATGTCaaagGTGGCAAGTCATATGACAAGGATCATGTTGTGATTTGGACGGAGAGCGAGGAGAGGCCTGGCCAGCATTGGGAGCTGGAGCTCCTGTAGCGCAGACACGCTGGACATGGGGACAGTGCTCGGCCTCAAGGGGTGACCAGTACTGGTGCTCTGCCTCAACAAAGCCCTTGATTCTGGCGTCTGAGCTCAGAGCTGAAGTATCAGAAGCTGTTTACATCTGTATCTACAAGGCAAACTCTGCTGGACATGAGGTGCCGGTCTGTGCTGTAAAAGCAGGGTGACACTGTGATTCATGACACATCGCCAGAGACAGAACAGCCTTCTCTCCGGTCATTTGTCTCATTGTGTGACCCTGTCAAAGAGCCCAGTGCATTACAGAGAGATATGAGCATCTATTTAAGATGCTTGTGAAATACAGAGCAGAACTTGGCAAATCTACCTGCTtcattgcttgtgtttttcctgcactgtttaaagatatatatgttgttatttgGAGAAGTATATCCCATGTCAAATGTACATACAACTAGAAGATTCTGtagatatttttcattttctcgtCTAGAAACATCTTCCTTACCTCAGGAAAGAGGTACGGGGACATTTCTTGATGCTGTAAATCTTTTATGAACAGCTATATTGTTTGTATCTATTAAGCAAGGATTCTATCTATTTGTCTCTAGGTGAAAgttacaatgttttgtttgtttgtttgtttgttttattcttttcaaGGAACCCTCTGGGATTCTGTACAGCAGATATTTAACAATTACTCACccactgtttttattgtgatatttttttactgaaagTGAATGTTGAGAGGAAGAAGCTACTTATTGCAATTTTAGTATATATTCAGGctgtgtgcgctccttcacgatgcaaaacacacaaatccggtgcaaaatagtcgttaagtgtgagctgcgcaCTGTTCACAAACttgggtcggattgtagaaatcgtgtagtgtgaccccggcattagtaaaatcaaaaaatgtaatttagactCCGCCTATATGTCCTCTTGAAATAAGTAAAAAGGGACATTGCGTGGTACAACGAAAGAGAGGGAATTCCTTTTGACTGTGTTTAACAAAGGTCAGattaatgaaaatgcatttgggGCACATGCTATAATATAGTTACATCTATGGCAATTGATAAGAAAGATTAATACATATCAAATAACAACCTATACAAGTATTATTGGTTATAATGATGACCAATTATCTGATGAACTGTCTTCTAGGAAAGTGAAAATGAGACTCAAAGGGCAACCAAAGTGTTTAATCCATTAAAACCTGAGACCAGATGATACTGTCATCAAACGGTGAAGCTAAGGTTTTCATGTTCAATCACATCTTCCGCAGAGCATAACAGCATAACAAAATGTTGTTATTCACAatattcacaatatatttatagtttacaGATTGCTTATTAactgttatatataataaacattataaaaggtttactgcatttgtgtttcaaaCATATGTCCATAAACATATCATGACTAATTTGAATTCAAGCTCTAGTGCTAGTTGCACAAAGCAGGTGTAATTTATATACCATGTTTTATCCATCTGTGGCTTAAATACAGTGGGACAAAACAATGATAAGGTACTTAATACTGAGATGCTCAGGACCATATGCTTGTAAACGTTACCAGCGTTTTTTcctaatgggggatttcaaatTAGAGGGGAAGTGTCACATAAAACTCAATGTACCAATTTTAGCAAATGATCTACTTTGATTGTTCTATTACTTGGTTCTATACGGTGGAGGCTGAACATTGATCGTGCCATTAAAGTTTTATCAATATGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010793 True 3753 mRNA 0.47 19 43198 69595

Neighbor

gene id symbol gene type direction distance location
AMCG00010795 NA coding upstream 3682 73277 ~ 112516 (-)
AMCG00010792 stk40 coding upstream 45223 114818 ~ 126599 (-)
AMCG00010796 NA coding upstream 57384 126979 ~ 133324 (-)
AMCG00010790 NA coding upstream 64137 133732 ~ 134094 (-)
AMCG00010791 NA coding upstream 81479 151074 ~ 156797 (-)
G102332 NA non-coding upstream 61755 131350 ~ 131582 (-)
G102360 NA non-coding upstream 217678 287273 ~ 287693 (-)
G102362 NA non-coding upstream 218154 287749 ~ 287971 (-)
G102367 NA non-coding upstream 417678 487273 ~ 487531 (-)
G102372 NA non-coding upstream 490839 560434 ~ 560797 (-)
AMCG00010794 NA other upstream 66774 136369 ~ 149829 (-)
G102434 NA other upstream 905958 975553 ~ 978127 (-)
AMCG00010806 NA other upstream 964235 1033830 ~ 1034874 (-)
AMCG00010843 NA other upstream 2412279 2481874 ~ 2496446 (-)
G102762 NA other upstream 2670221 2739816 ~ 2778023 (-)

Expression


Co-expression Network