AMCG00010795


Basic Information

Item Value
gene id AMCG00010795
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 73277 ~ 112516 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010795
ATGCAGATGTCCGGCACTGTAAACCTTGTCAGCGTGACGCTGGTGTTGAGAGCCATGGCCAAGAAGAGCATCGCCAGGAAGAGtctcaaaaactttttttccaAGAGCGAGCAGAATCTAAATGAGCCCGAGGAGAAAGACAAAGGAGCACGGTCGTTTAAAAACTTATTCAAACAGGACCGCAGCAAGAAGAAGAAACACGACCAGCCATCCGAGCAACAGATAGAGAGCAGCGCTGCCAGGACCGATGAAGACGGCCCAGGGGAGAACGGGGAAACGTGGACAGATGCCATCGGTCCCCAAAATACTTCAATCTATGGCACAGCTCCTAGGTCAAAGAAAGGCAACTTCAGCTACTCAGAGACAGACCTGCACAAGAGCAGCAAGTCTAGTAAATTTAAAACCTTTGGctggaggagaaagaagaagaaggacaATGAGATGTCCAGTAGTTCAGTCCCTCAGGCCACAGAGGCACAGCACGCCCTGGCAGAGCCCGAGGACAGCGGTACTGGTGCCGCCACGCGCCCAAGCAATGGAAGCTCCAGTGAAGTCCAAGATCTCCTTTCTGAGGAATTGGATGAGCCAGGAGATGGAGCCCCAAACAAATATGTCCACTTTGATGCATCTACATCCATGGAGTCTGTGCCCAAGTCCACGGTCGTGTCTGCCGTCTCTCCTGACCGAAGCCTGCATCAGACTTTGGATCTGAAGGGCTGGACGGTCGAGGATGTAAAAATTAGCTCCTACCTAGATGAACCAGACAACGAAGAGCAAGAGGAACTCCAAAAAAAGATCCAGAGGAAATACGCCAGTCAGTCACATGGCGAGGGGGTCACCGCTGCCCCACCCCCCCTCGATCAGGAGGACTCTGGGTTCGATTCAGTCCCTGGAGCAGCTGAGCAGGTCAAGTCTGCGTTGCACAGGGCGATGCACTTACAGCCCTCCCATGCAAAGACCTGGAGTGACTCCATCGACGGCATCACTGCAGAGGAAGTTGACACGGGGGCAGATGGTGGTGATCGCAGAGACGACGAGTTTGACAGCATAGATGAGGGGTCTGCCCAGATAGGGGTCTTGGAGGaatggcagcagcagcagcacgggGATGCTAGAGAATCAGCACCAGATCAGAGCCAGGGGATTATGGAATTAGCAGAGAATGCAGCCAACGAGGTCAGCCATGTTACGGACGTCCCCCTGCGAGCGGGAATCTTGGCATTAGCAGAGAAGGATCACGAGACCTTGGGCAGGGCTGGGGAATTCAACTACAGTGAACAAGTGCTGATCTCAGCTGACCAAAGCGATGGAAACAGGAGTGGCAGCTTCACCTCGGAAGCCGGCAGTGTTGGCTGGAATGTTGAATCAGGCGATCAGAACCGAACTGAACAGCATGCTCGTCAAAGTGAAGAGAGCGAGGACTGGGGACGAGCTTCTCCACATGAGGGCAGCTTGGAAGCTGATGAAAGAGGCCAACACCATGTTGGTAGTGATTGGCCAATCCCAAGGGAAGAAGAACTTTTAGATAGAAGAAGTCAAGGGCTGTATGAACTTCAGAGGGAGGAAAACCTGGAAGGCTATAGTGAGAGCTGGCTGAGGAGGACTGAGTCTACTGGCAAAGATACCTACACTGAATTGGACCAGGGGCTCATTGCTCATACTGCTCCAGAAGGCCATGGTTTTTCTGTGAGGAAAGGAAAGCTAGTAGAAACCCCTGAAGCCCACAGTGAAACAAGGGATCAACCAGATATAGGTGAAGACCACGACTGGTCAGTGAGACCCTCTCTGCCCTTTCTGAACAATCACACTGGGGTGCAAAAGCCGTCTGAAAGGAGTGAAGAGGAGCCAGGAGAGTCGAAGCACTCAAGCAGCCTTGCCCTTTGGGAGGTGAAAGCTGAAGCAAAGGGTTTCCTGATACGAAGAGGACAAACCGGCAGCTCAGTGAAGCCTGTGCTTGTGATCTCAGAGATTGAATCAATGCAGAGGAGCTCCAGGGGCGACTCCGCGAGACAGGAACCAGAGGCACCTGTTCGACAGGTCACCAGCACTGAGGAATCCCAAACATCTCCACCCACAGCAGGGTGTACCACAGAGACTGGGGGGGAGGAGCCGGCAGGGAACAGCACAGCGAACTCTTTAGAAACTGAGCAGCAGGCAGCCCCACCTATGCAGGAAGTGCTGCAAAGGGAAGTGTGCTCTGAGGGAGAGCACTCAGGTGGCTTCCAGCtgagtgagagcgagagatCGGGCAGACATTCAGGAGAGGCACCATTGGAAAAATTTTTCAATGTAACTGATGCCTCAAGAGAAATAAATCAGGATTTCCTCCCTGCAAGCCACAGCCCTGTGGAACTTCTGCACAGCCCGGCTGTGAATGGGTCCCACAGCACTGCTTTAGAAAACAGCGCCATGGCCAGCTCGGGAATCGGTGTGCTGAGCACCACCCTGAATGTGAAGCCTGCTCTCCACCAAGACACCCTTGATGACAGCAAGAAGAGGTTTCACAAGGTGTCTTTGATCACAACCAGTGACTCCGACCACTCCGGCGCCCCGGTACAGAACGGCAGGAGTGGAAGCCACATCCGCGAGTTTCGCTTTTTGTCTGATCCAGACGGCACCAGTGCCAGCCCCGCTTTAGAGACCACAGCTGGGCTTCACTCCAAGGACATATTTCAGGATGCTGTACCCTCTGCCAGAGGCTATACTGATGAAGGTGAGAGAGGCTTCAAGGAGACCTCTTTTAGACAAATGACAGATTCAGATAAAAGGCAGGGAGATTTTCCAAAAGCTGCTGGGGAAGAATACCGGTATTCTGGAAACCCTGCCTCCTCAGGGTTGAACTGGGAAGCTACATTTACTCAGCCAGAAGGAGAACAAATGCTTGGGAGTCAGGTGACAGACTCGGTATCCGACAGCAACTCCAAAGGTCAACACGGCTTTCTCTCTGATAGTGGAGTTACTCAGAGCTGGGAGGAGCCTGACTCAAACATATATTATGACTGGGATTCCCAGGACGACCCACAGTATTTCTCGGAGCTAGACGCTGTTTTCTGTGGTGTCTTCACAGCCAAGCGAGTGGAGTTCTTACCCTCCCCAACCCCAGAGGACCCTGAGTCTCCACATGACATGGACAGCTTTGTTGACACTCTGAGGAGCATGGATACTCCACTGACCATAAGACACCCCAGGGGCATCAGACCACCCAGACCAGTGTCTCTGCCTAGCTtctcctccctgcctcccaTTGTCGAGGACCTTCCCCACCAGGAGGCAAGCACCCCCCGCTCTCTTGAGCCATCAAAGTCCTTGGATGCAGTGGACGCTGTGGCACCAGTACCAGAGGCAGCCAAGCTAATGCTCCCAAAAGACCTGGGATTGCGCCCAAATTCCCAGAAAGACCGTGTGTCACCTCTGGAGATGATGAAGAGGCAGATGGAGCAGCAGAGCACAGAGGAAAAGTCCAAGACCATCTCTCTGCCAATGAGAGCATCAGCCGACAACAGCATAGTTTTCAGGAGAAATTCTTATGGGGCCAGTTCTCTGGACAGCACACCTTCCCAGATGCCTGAGGGGGGTCCCAGCTCCACGGGGGACAGGCAGTACTCCAGGCTGGACAGCAGCCTTCTGTTCTCCAACTACCGCTTGACAGAACAGCGGGACAAGCCTGCTGAAAATGGCAAGGGAGACGGACCTGTCACCAGACAATTTCCACGCCAGTCCTCCTTGCCGGACCTCTCTGGCAGCATGGAAAATAATCCAGATGGCCAGAAGCCCAACGGCTACGAGCGCTTCTCCTATCTGCTGTCCCCCACCAGCTCCCTCTCTGGAGCACAGGAGACGCCCCAGATCAGCCTTCCTCCCTCATCTCTACAGCCTAAAGCACAGGCCGCCAACGATCCCCCACCAAAGGCCACCCTCTCGCCTACTTCCCAAGAGCCTCCAAAACCCACCTTCCCTGATATCTCATCTAAGATCAGCCTTCCTCCCAGTCCTCTGAATTATAATTTACCAGCCTTTAATGAGAGCCCAGCAAAGGTCAATCCACCTACTAAAACCATGGACTTCCAGAACTCCATCTTCAGTGCCATCCAGAGGGGACCCTCTTTAGTTGCCAGTGCAGATGTGGATAGGAACATCATTCCCAAGTACAGAGCGTTCCCAGATGCCTACGTGAGTACAGCTGCTGTTTATGATGGATTGTGTGAGAGCTGA

Function

GO: NA

KEGG:

id description
ko00512 Mucin type O-glycan biosynthesis

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010795 True 4212 mRNA 0.53 5 73277 112516

Neighbor

gene id symbol gene type direction distance location
AMCG00010793 NA coding downstream 3682 43198 ~ 69595 (-)
AMCG00010792 stk40 coding upstream 2302 114818 ~ 126599 (-)
AMCG00010796 NA coding upstream 14463 126979 ~ 133324 (-)
AMCG00010790 NA coding upstream 21216 133732 ~ 134094 (-)
AMCG00010791 NA coding upstream 38558 151074 ~ 156797 (-)
AMCG00010797 NA coding upstream 44974 157490 ~ 193075 (-)
G102332 NA non-coding upstream 18834 131350 ~ 131582 (-)
G102360 NA non-coding upstream 174757 287273 ~ 287693 (-)
G102362 NA non-coding upstream 175233 287749 ~ 287971 (-)
G102367 NA non-coding upstream 374757 487273 ~ 487531 (-)
G102372 NA non-coding upstream 447918 560434 ~ 560797 (-)
AMCG00010794 NA other upstream 23853 136369 ~ 149829 (-)
G102434 NA other upstream 863037 975553 ~ 978127 (-)
AMCG00010806 NA other upstream 921314 1033830 ~ 1034874 (-)
AMCG00010843 NA other upstream 2369358 2481874 ~ 2496446 (-)
G102762 NA other upstream 2627300 2739816 ~ 2778023 (-)

Expression


Co-expression Network