AMCG00010803


Basic Information

Item Value
gene id AMCG00010803
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 977249 ~ 1008155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010803
ATGGACCAGTCGGTGGCGATCCAGGAGACCCTGGCAGAGGAGGAGCACGGCACAGAGAGCCGACTCCTCGGGCTGGTGGGACATGGGGACGAACATGCGCTGTTCATCTACACTCACAGACGAATGGCCATTACTGGAGATGATATCACAATAGATGAAGTCATCCCCATCGATGGAGACTTTGCTGTTGAGGAAGTTTCCTCTGTGAATGAGCTCGCCGTCGTTGGCTCGGACTCCACCGTGACGATCTCTGTGCAGGGGCTGGTGCTGGAGTTGCGGCTGCATTTCGGCTCCAACAGTCGCATGTTTTTGCATGAAGTCAACAAAGCCTGTCAAGGCGTCTGTAAGCCATCTCACACAGAAGGGCCTCAGTCGCAGTTCGTGTGGCTCTCCAAATACCGCAGATCTTCCAAGATCACCAGCTCTGCGGCAATGGACTCGGACTCTCAGACCTCGGACCACAGAGGAACCCAgTCTGTGGTGGATGGTCAGATACAGGCCACCGATGAGCTGAAGGCGAACCACAGGAATGACCAGAGCGGGCTGGAGAACAATGCGGACAAGCACGACAGAGTGACGGTGGAGGCACGGGACAGCATGGTGCGCTCCTCCAGCCACACAATCTCGCACAAGGCCCAGATCCTCAGCATGCCCCAGTTCGGCCTGCGGGACAACCTCATCAAGTGCGAGCTGCTGAGAAGTGAAGACGAGTACACTTACATCAAGAACTTCAGttttttcaTAGGAACGTACAACGTGAATGGCCAGGCGCCCAAGGAGTGTCTTAAGCCCTGGCTCAGCTGCACCCCCGAGCCCCCGGACGTGTACTGCGTGGGGTACGAGCTGGACCTCAGTAAAGAAGCTTTCGTCTTCAATGACACACCGAAGGAGCAGGAGTGGAGCAGAGCAGTGACGCTGGGGCTGCACCCCGATGCCAAGTATGCCTTGGTCAAGCTGGTGCGCCTGGTGGGCATCATGCTGATCTTCTACGTGAGGCAGGAACACGCCGCGTTCATCTCGGAGGTCGATGTGGAGACGGTGGGGACGGGCATCATGGGCCGGATGGGCAATAAAGGCGGGGTGGCGATCAGGTTCCGGTTCCACCACTCAGACATCTGTGTGGTCAACTCTCACCTGGCCGCCCACATCGAGGAGTACGAGAGACGCAACCAGGACTTCAGGGAGATCTGCTCTCGGCTGCTCTTCCGCCAGCTGGACCCCACCTTGCCACCCCTCACCATAATGAAGCACAAGATAAGTGAGCTGGAGGTGgaagaagtgaaaaaatatattgagaaCGAACAGTTTGACAAACTCTACAAGTACGACCAGCTCAAGCGGCAGATTGACCAGCAGGCCGTGTTCGTTGGCTTCAATGAAGGCTTCATCAAATTCCAGCCAACTTACAAATACGACCCCGGGTCTGATCGCTGGGATACGAGTGCCAAATGCCGAGTGCCGGCCTGGTGTGACCGAATACTGTGGAAAGGAAAGAACGTCCGGCAGCTGAGCTACAGCAGCCACATGGAGGTCACCATCAGCGACCACAAGCCCGTCAGCTCTGTCTTCGAGATTGGGGTGAAGGTCGTGGACGAGGTCCGGCACAAGAAGAAATTCGAGGAGATTGTGAGGAATATAGATAAGATGGAGAACGAGTGCATTCCCTCAGTGTCGCTGTCGGGCCGTGAGTTCTGCTTCAAGGACGTGAAGTTCATGCAGCACCGCGCTCACACGCTGACCGTGCACAACGATGGGCAGGTGCCCTGCCAGTTCGAGTTCATCCAGAAGCTGGACGAGACGGAGTACTGCAAGCCCTGGCTCACAGCCAGCCCCTGCAAGGGCTTCTTGGCACAAGGAGGGAAAGTGGACATCGAGCTCGAGGTCTTCGTGAACCGGACAACGGCCACGGAGCTGAACTCGGGCCGGCAGCAGATCGAGGACATCCTCATCCTCCACCTCGAGAGAGGCAAGGACTACTTCATCTCGGTGACGGGCAACTACCTGCCCAGCTGTTTTGGGTCCTCCATCCAGATGCTGTGCCAGCTGAGGGAGCCCATCCAGGACATGCCTCTAGAGACGATACAGAAGCTGACTCGGATGCCTCTGGACTGCGCCGATGGGGACAACCTGGGCTCTGAGAAGCCCCTCGACATCCCCAAGGAGATCTGGATGATGGTGGATCATCTCAATCACTCGGTGGCCGAAGCCCTCCTGCTCTTCCTGGACGCCCTGCCGGAGCCCGTGATCTGCCACTCCCTGTACCAGCAGTGCCTGGAGAGCTCTGCCAACTACGCCCTGTGCAAGAAGGTTGTCTCCATGCTACCTCTGTGCCACAGAAATGTCTTCAACTATTTAACGGCGTTTCTGCGAGAGCTGCTGAAGAACAGCGCGCACAACCACCTGGATGCCGGCACTCTCGTGTCCATTTTCGCTGCCTTGCTGCTGCGCTCCGAATCCCAGCAAGACTTTacagagaagaagaagacgCAGGAGTTCGTGCACCATTTTCTCACCCCGGGGAACTTTTCCTGATTGCTGCGTCTGAGTATTCTGTACAGGACCTGACTATTTTTGTAAACTGTATGATGACAAAGTaaaaaagcttaattttatAAACGCTTAGGTAAATTTCCAAGTCATGTGTTTTATAGtccactgtattttattttgtattttatgatcTGCTACCAGATGACTTTCCAGCTGGGTTTTATGAGAAGGCATTGTTAGGCCAAGAACAGCTGCAGACAAACTgacattttatatgttttgtatgtagtaattatttaaagaataattaaaatatgtttttattattc

Function

GO: NA

KEGG:

id description
K01099 INPP5B_F; inositol polyphosphate 5-phosphatase INPP5B/F

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010803 True 2819 mRNA 0.54 22 977249 1008155

Neighbor

gene id symbol gene type direction distance location
AMCG00010801 sf3a3 coding upstream 20018 951523 ~ 957231 (+)
AMCG00010800 NA coding upstream 52047 915734 ~ 925202 (+)
AMCG00010788 NA coding upstream 939026 35149 ~ 38223 (+)
AMCG00010789 NA coding upstream 945083 30968 ~ 32166 (+)
AMCG00010805 mtf1 coding downstream 4428 1012583 ~ 1028590 (+)
AMCG00010804 NA coding downstream 26529 1034684 ~ 1040844 (+)
AMCG00010812 NA coding downstream 85967 1094122 ~ 1099009 (+)
AMCG00010808 LOC106583270,LOC106605111 coding downstream 97028 1105183 ~ 1108360 (+)
AMCG00010810 NA coding downstream 118578 1126733 ~ 1131681 (+)
G102415 NA non-coding upstream 11044 965961 ~ 966205 (+)
G102396 NA non-coding upstream 170025 806994 ~ 807224 (+)
G102373 NA non-coding upstream 414056 560886 ~ 563193 (+)
G102363 NA non-coding upstream 584196 392730 ~ 393053 (+)
G102361 NA non-coding upstream 689278 287752 ~ 287971 (+)
G102516 NA non-coding downstream 466843 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 510244 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 539655 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 1166641 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 1243948 2252103 ~ 2252470 (+)
AMCG00010809 pdik1l,LOC107690927 other downstream 38247 1046402 ~ 1125186 (+)
G102531 NA other downstream 782033 1790188 ~ 1791723 (+)
G102535 NA other downstream 790285 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 936900 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 1031359 2039514 ~ 2064344 (+)

Expression


Co-expression Network