AMCG00010804


Basic Information

Item Value
gene id AMCG00010804
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1034684 ~ 1040844 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010804
AGCGTTAACCTCGTCTTTCTGGactaaaTCCAGTCATAGAGCTGTCATTTGTAACCCTGTCATTTGTCTTGCAACAAAAACTTTATTGGTAATGATATGATTAGTTATTcccatttacaaatatttacccACACCAGATTTCCTgcaagaatacaaataaaaaaataaaagggtttGAGTGACGTGGTTGTAGCAGTAACCCGGAAGCGGTTGGGGAATTACGTAGTCCTTCCGGAGGAGCCAGGCTTTGCGCCGGCGCTGCCCATGCTGCCTGCCGTCCGACACTCCCGCACTGTCCTCCCGCCGGCCCGCCGCCGCAACTTCGCCTCCAGGCCGATAGTGAACCCGGCCGCCATGTGCAAAGAGCTGCGGACCCGGGTGCTGCGACTTGGGCCGCCGGCGCGGAACGGGCCCTGCGCCGGGGACACACTGCACGGCTGGAGAGAGATCCTGGACTGCACCGTCACTGCGCTGCAGGAGGGCCGTGTGGTCGCCGTGCCCACAGACACTGTTTATGGACTGGCTTGTCTGGCGCAAAATCCAAAAGCCATCGAGAGAGTTTACAGCATCAAGGGCAGGAACGGGCAGAAACCGCTGGCTATATGTGTGGGGGAGGTGGAAGAGATCTACAAGTTCTGTAAGGTGACCGTTCCGGACCCGTTGCTGCGGGAGCTCCTGCCGGGCCCGGTGACGCTGGTGATGGAGAGATCGGCCGAGCTCAACCCCGACCTCAACCCCTTCACCCCGTTGGTGGGAGTGCGGATCCCGGGTCACGCCTTTATGAGGAAACTGGCCCAGCAGTGTGGGGGTCCCCTGGCGCTCACCAGCGCCAACGTCAGCTCCCGGGCCAGCACCATCGCCGTCGAGGAGTTTCGGGACCTGTGGCCGTCGCTGGGCCTCGTTGTGGACGGCGGCCCCGTCGGTGAGGTCATGAGTCCGGAGTGCCGCCTGGGCTCCACCGTGATCGACTTGTCTTCCCCCGGCAGATACGGCGTCATCAGGCCAGGCTGCGCCCTCACGGCTACAGTTGAAATTCTCGAGAAGAAATACAGGCTCTCGCTCGAGACGGCGGGTCAGTGATTCTCGCTTCTGCTCGGCTTACTCTGCACCGCAGCGGGCTCTGGACGGAGCCGTTCTGTGGCCCGAATACCAGAGGGGAACGAGGGAAACGAGACTCTGTGCTCAGAGCCTGAAGGAACGTCTGGAAAGCTGGATTTCTGGGAGGAGACATGCGTCCCTTTCTGTGGAGTTACAACAGCCATCAAAACTGAACCCCCAGGACTTACCAAAACCTTGTGCACCGAATACTGGCCAAGCGATCTGGTGGAAGGAAGTATTTTACCTTGTTTCAGATAAAATGTGCTTTCCAAAATCCCCCTGTTCCCCAATGAAGACGACGAGGGGGTGAGGTTCAGGGGgaacgtttgtttgtttgctgcgTCTCTGGATTAAACCGatcttgtgtttctgtgttgaaCCTGCTGGACCAGGGAGGATAATTCCGCCTGTGGATATCCGTGATTCATGAGGgagttttctttgttaaaattGCTTGTGTTTTGGCTCCTCTATCGGCTCGTGGATATTGTATAtccctggggtggggggggggtgacttGGTTGGCTTTatggtgtatatatgtaatttaactGTGCAtggcatgtatgtatgttttgccTCAATGGCAGTGTAACAGGCAGTACAGAAGCAGGACACCTCGGCTATCAGGACGGAGTTAATTTTACCGCCTCTGAAGCACGACAACCCGAATCCTCACCTCCAGCTGGCCCCCGGGGGTGTAAATGGACATGCAGCAATTATTAATGTACTGATGTGATGCTCGATTGTACAGGATGTACCTATAAGGTGTGCTTCTCAAGATTCCTGTTTCTTTTAGCATAACTGACCATGTTTCTCCCCATTCCTGTCAACCTGGCCGACCTCTCGCCTTTCTCTCACTTTTGGGATGCATGTAGCTGCTGGATAGAGGATGTCCTTTGCAGAGCAAATTCATTACTATCTGTTGACTTTTAATAATGGGTTTTATATACCATTTTGGTTCAtctccatttatttattcccgtctggaaaaacacaataaatgatCAGGTGGATTATTATTCaagttgtgtttgttgtctCATCCTCATTAATATTCTTGTAGATCACCGTCCCATCTGGTGTGGCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010804 True 2192 mRNA 0.53 7 1034684 1040844

Neighbor

gene id symbol gene type direction distance location
AMCG00010805 mtf1 coding upstream 6094 1012583 ~ 1028590 (+)
AMCG00010803 NA coding upstream 26529 977249 ~ 1008155 (+)
AMCG00010801 sf3a3 coding upstream 77453 951523 ~ 957231 (+)
AMCG00010800 NA coding upstream 109482 915734 ~ 925202 (+)
AMCG00010788 NA coding upstream 996461 35149 ~ 38223 (+)
AMCG00010812 NA coding downstream 53278 1094122 ~ 1099009 (+)
AMCG00010808 LOC106583270,LOC106605111 coding downstream 64339 1105183 ~ 1108360 (+)
AMCG00010810 NA coding downstream 85889 1126733 ~ 1131681 (+)
AMCG00010811 ctps1a,LOC108415321,LOC107708718,LOC108433599 coding downstream 98877 1139721 ~ 1147866 (+)
AMCG00010816 LOC108414691,LOC103028730,LOC107689573,LOC105903723,LOC107732921,LOC107595911,LOC107556890,LOC107708721 coding downstream 115813 1156657 ~ 1160427 (+)
G102415 NA non-coding upstream 68479 965961 ~ 966205 (+)
G102396 NA non-coding upstream 227460 806994 ~ 807224 (+)
G102373 NA non-coding upstream 471491 560886 ~ 563193 (+)
G102363 NA non-coding upstream 641631 392730 ~ 393053 (+)
G102361 NA non-coding upstream 746713 287752 ~ 287971 (+)
G102516 NA non-coding downstream 434154 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 477555 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 506966 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 1133952 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 1211259 2252103 ~ 2252470 (+)
AMCG00010809 pdik1l,LOC107690927 other downstream 5558 1046402 ~ 1125186 (+)
G102531 NA other downstream 749344 1790188 ~ 1791723 (+)
G102535 NA other downstream 757596 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 904211 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 998670 2039514 ~ 2064344 (+)

Expression


Co-expression Network