AMCG00010807 (maneal,LOC105903681,LOC106583256,LOC102777073)


Basic Information

Item Value
gene id AMCG00010807
gene name maneal,LOC105903681,LOC106583256,LOC102777073
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1042001 ~ 1056921 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010807
AAAGAAAGAAGGGAACAAAACggacaaaaaactaaagcaaagcGCACTGCCGCCACAGACAGCGCTCAGACATACGGAGACATTTCATCAGTACCGAGCATCACAGACGTCCGGATGGAAACGAGCTGCGCGGCGGGGCTCGGGTTAACGGATCCGCCGTCCGGGGAGCTGGACTGACCACCGGGCTGCTCCGGGGACCTGCAGAGACCCGGATGGCAGCGATGCCTGGCTTTGTGGGCTGAGGCCACAGCCGATCCGCGGATATAGCATGGAGTTCATCCCACGGCTTCTCTACTGACGAGGTTTTCCTTTTATGAGCAAAATATcaggtttttattaatttgttatcaTCGCCAGGGCTTTAGATCTAATGCGACGCTTACTTGTATGTTGGGACAATAGACGTCTGTTTTCGACGGAGATAAATGATAGGAAAGAAGCGACCCTGTGTGGCGAGCCTCCGGATAAACAGACCCGCTGTCCGGCTGGAGCCCGTGGTTTGGGGAGCGGTTGATTTCATGATTAAATACAGCCAGTGGGTTTAAAATGGCACATCCGTGAGCATGCAGTGTAGATAGGAATCgtaaatgtatctttaaaaacaatgggATGCATTGAGATCAGTGATATGCTGCTCTTCCCGTGAAAGGCTCGGTTTCCCTGGGTTAGTTTTGCGGGCTGCAGCGCTCAGGTCGGAGATCGTCGTGTAAGGACAGAGGTCGGGGTTTGTTAAAGTTTTTTTATATGATTGCGCCGGTTTCAGGTCCTCTGTTTTTTCCCTCTCAATAATTGCAGcagattatataaaaaagatgCTGTGGAGATTATAGACACTGTTTTGCAGAAATTATGAGGATCTGGAGCGCAAACCTTCTGCCCAATGTAAGGCTGCTGTGCGTTACATAAAATACCGCAGATAGCCTACCTTATTTCTAGACACCATCCACGTTTTCCCAGAGTTTAGCTTAGGCCGTATCTCTCGCTGTCGGATGACACCGCTATGCATGGACTGTCCTTTTCAAGGAGCTCATTGAAATGTAGCGACCACTTCGCCCTGGCGACCCTTTGAGTTTGTCATTGCGTTCACAGAGAGACGGGCTACCCGCACCCCTCTGCGAGAAACTGCGCCTGCCTGGATCATAGAGACGGAGCATCATGGCCAGACTGCGCAAGAAGGCTTGTGTGGCTCTGTTTCTATTCACGCTTTTCATTTTCGGCACCATGATGGGCTTGAGGACATTGAAACCCAGCGACGGCTTCTCCGATTTAGCCCCTGGTCTGGAGCTGATGCCCGTCGCTGGGGACAGAGTGGACAGGCGTGCGGTCAACCAGCTGGTCGTCTCCCCGGCCCCTCGACCCATCAGCAACACTAAAATCGTCTTCTCCAACTCTGGTCCCGACAACGGCATATTCTATGAcgtgcatatattttattatgtctGGTACGGGAATCCCAAAATGGACGGAAAATATGTGCACTGGGACCACGTGTTGGTGCCACACTGGGACCCTAAAATTGCCGCCAGTTACCCCAAAGGGAGACACACGCCCCCGGAGGATATCGGCTCCAGCTTTTACCCGGAATTGGGGCCCTACAGCTCCAGGGACCCGAGTGTCCTGGAGTCGCACATGGAGCAGCTCGGAGCCGCAGCCGCAGGGGTGCTGGTTTTATCTTGGTATCCACCAGGCATGGCTGACGACAACGGAGAACCCACTGAAGACTTGGTGCCCGCTATAATGGACGCTGCCCACAGGCATAGTATCAAGGTATCTTTTCACATCCAGCCCTACAAAGGAAGGACTGACCGCACGGTTCACGACAACATCAAATACATCATCGACAAGTACGGAAAGCATGGCGCCTTCTACAGATTCAAGTCCAGCACCGGGAAGACCCTGCCCCTGTTTTACATCTACGACTCGTACCTGACTCCACCCGAGGCCTGGGCCGACCTCCTGACGTCGTCCGGCTCGCACAGCCTGCGCAACACCCCCTATGACGGCCTATTCATCGCCCTGATCGTGGAGGAGCGCCACAAGCACGACATCCTGTCGGGGGGCTTCGACGGCATGTACACTTACTTCGCGTCCAACGGCTTCTCCTTCGGCTCGTCCCACCAGAACTGGAAAGCCATCAAGACCTTCTGCGACGTCAACAACCTGATGTTCGTCCCCAGCGTGGGCCCGGGCTACATCGACACCAGCATCCGGCCGTGGAACAACCACAACACGAGGAACCGGGTCAACGGGAAGTACTACGAGACCTCGCTGCAGGCTGCGCTCATGGTCCGCCCCGAGATCGTCACCATCACCTCCTTCAACGAGTGGCACGAAGGCACGCAGATCGAGCGTGCGCTGCCCAAGAAGACAGTCACGCGCATGTACCTGGACTACCTGCCGCACAAGCCCGACCTGTACCTGGAGCTGACGCGCAAGTGGGCCGAACAGTTCAACAAAGAGAAGGAGCAGTGGCTCATGTGAGTCCGCCCGTCCGCCATGTTGTTTTAAGCAAGGGTCCCTTTAGTTGGCCTTTCACTCAAGGTTGTACAACTCTAGTCAGCTTTAATCCTTTGGAAGGCTTTTCCCTTCTTTCCTCACTGAAACTGCCCAGAGACGGCACGAGACGAGTTTCTGATTCCACAGCTggaagacagacacaggaccTTATGTTCCAAAGGTGTGGAGGCTGTGATGTGTCCAGATGTTTACGTTCACCTCCATCCGTTCCCGATGACCCTCGTTTCCATTTCCTCAGCTCACCACTGCGGTCTGTCAGATCTCATGCTAGGATACCCGACAGCTGACCTTCCCTGCCTGCGATGCAAACTGACCTTGAGAGAAGCCGCCGTCCCCAGACATCGCTTCCGTTCACCTTCGCCACTTCTGAACCCAGGCCGAACAGACGTACGGTTTTCCTCTGTGATAAGAGTTTTGTACTTCCTCATGGTATCCAGAGTTTTCAACAGATTCCAACAGTACATTTGCAGAACTGAGACTAAATTGCGCAGCTTTCACAATTAGCAAGAGGAACAAAATCAGTGGCTCAACGCTTCAGTGGGACAAGAAAAACCGTCTGCAACACATTGAGAACTGACATTTTCTCCTTTCTGCTGTGTGTAATGAATGGGAAATGCAGAAACCATAACCTTTACTTCATAGCCTCATTCTTTACCCTCTGTAACCGATAGTTTCTCAGGATGTTGCCGAGCCTGAATTGATGAAAACCTCACCCGTCTCTCCACAGACGTGCTCCGCTGTAAGAGATGCTCTTGAAATGCAGATTCtgaatttgctttttttgttgtcctttcctgtgtttgtttccGGTTATTAGAAGGGGATGTTTTGCCCAGTCAGTCATAGATGGGTCATAGATGGGAGGGGAAGATATGgattttgatacatttaattactaCTCCAAAATACCTGCAGCTTTTTGGGGCTTGTTCACCTTTAGATCCCTCAAACCCTggtttttttgtaaaatgatgTACGATGTGTGTGACCTATTTACAATCGCTTTGTGAGGCGACGCTGTTTAACGCCAAGGTGAAATCACTGaacattttaagaataaaagAATGTGC

Function

symbol description
maneal Predicted to enable alpha-mannosidase activity. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human MANEAL (mannosidase endo-alpha like).

NR:

description
PREDICTED: glycoprotein endo-alpha-1,2-mannosidase-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010807 True 3587 mRNA 0.51 4 1042001 1056921

Neighbor

gene id symbol gene type direction distance location
AMCG00010802 NA coding downstream 98535 935183 ~ 943466 (-)
AMCG00010799 grik3,LOC106605119,LOC106583195 coding downstream 412108 587856 ~ 629893 (-)
AMCG00010798 grik3 coding downstream 464827 565231 ~ 577174 (-)
AMCG00010797 NA coding downstream 848926 157490 ~ 193075 (-)
AMCG00010791 NA coding downstream 885204 151074 ~ 156797 (-)
AMCG00010813 NA coding upstream 75849 1132770 ~ 1136837 (-)
AMCG00010819 NA coding upstream 109179 1166100 ~ 1209262 (-)
AMCG00010818 taf12,LOC107705731,LOC107588503,LOC107566933,LOC107755488,LOC107700725 coding upstream 157484 1214405 ~ 1219326 (-)
AMCG00010817 NA coding upstream 165166 1222087 ~ 1242650 (-)
AMCG00010828 NA coding upstream 735856 1792777 ~ 1796592 (-)
G102443 NA non-coding downstream 33873 1005117 ~ 1008128 (-)
G102433 NA non-coding downstream 67360 974435 ~ 974641 (-)
G102432 NA non-coding downstream 75785 965962 ~ 966216 (-)
G102372 NA non-coding downstream 481204 560434 ~ 560797 (-)
G102367 NA non-coding downstream 554470 487273 ~ 487531 (-)
G102466 NA non-coding upstream 92513 1149434 ~ 1151389 (-)
G102470 LOC108245179,LOC103363630 non-coding upstream 99635 1156556 ~ 1161075 (-)
G102498 NA non-coding upstream 197799 1254720 ~ 1257986 (-)
G102507 NA non-coding upstream 359340 1416261 ~ 1459547 (-)
G102519 NA non-coding upstream 461454 1518375 ~ 1518699 (-)
AMCG00010806 NA other downstream 7127 1033830 ~ 1034874 (-)
G102434 NA other downstream 63874 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 892172 136369 ~ 149829 (-)
AMCG00010843 NA other upstream 1424953 2481874 ~ 2496446 (-)
G102762 NA other upstream 1682895 2739816 ~ 2778023 (-)
G102774 NA other upstream 1701557 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 2123049 3179970 ~ 3182619 (-)
G102990 NA other upstream 2263892 3320813 ~ 3419176 (-)

Expression


Co-expression Network