AMCG00010810


Basic Information

Item Value
gene id AMCG00010810
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1126733 ~ 1131681 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010810
CGCAGACTATGGCGGCTGCGCGGTGTGTGGGCTCGCTGTGGCGGAGGACAGGTGTTCACAAGCGGGACTTGCGCAGGTTCATGTCCGCTGCTCCTCACTGGGACCCGCTCCGCCGACACCTGCCCGTGGCCCGGCCCGGACGCCACTCCTCCTCGGCCTCTCCGCGACAGTGCGCCGCGCTGGTGTACCGGAGCCACGGGGAGCCCGGCCGAGTGCTGCGGACGGAGACGATGGAGCTGAGTGCTCCGGGTGAGAGGGCCGTCCTGGTGAAGATGCTGGCCGCCCCCATCAACCCCTCGGACATAAACATGGTGCAAGGCACGTGGAGGACAGCTGCAGTGTGCCCTGAAGAGGCCCTGATCGCGGTGCCCAATGACATCCCGCTGCTGAGCGCCGCGACCCTGGGGGTCAATCCCTGCACCGCCCTCCGGATGCTGCTGGACTTCGAGACCCTGAACCCAGGTACTGCTGCCCTCACGCCCCTGCCTTCAGAGACGGGTGCCCAGGGCTCGGGTTTCACTCCCTGTGCTCCCGTCTTCCCAGGAGACTCCCTGATCCAGAACGCGGCCAACAGCGGGGTGGGCCAGGCCGTCATCCAGATCGCAGCGGCCCGCGGGGTCCGCACCATCAACGTGGTCCGACACAGGCCTGAGCTCCACTCCCTCTCCGAGAGGCTGCAGGCTCTGGGCGCGGACCACGTGCTCACAGAGGAGGCTCTCCGCAGGCCGGAGATGAAGGAGCTGTTCAAGAAGTGTCCTCGGCCCCGGCTGGCCCTGAACGGCGTGGGAGGGAAGAGCGCCACGGAGTTGCTGCGCCATTTACAGAGCAGGGGGACGATGGTGACCTACGGGGGCATGGCCAAGCAGCCGGTGACGGTGCCCGTGGTGCGCGGGTTCTGGGTCACGCAGTGGAAGAAGGACCACGCTCACGACGAGGGCGCTCTAGGGGAGATGGTGGCCCAGCTGTGCGCTCTGATCCGGGGGGGGCAGCTCTCCGCTCCGGCCTGTGAGGAGGTCGGGCTCCAGGACTTCCACAGGGCCCTCGACGGCGCCATGGGGCCCTTCACCTCCGCCAAGCAGATCCTGGTCATGTGACCCCAGGGGGAGGTGCCACAGCCTGGGTCGGGACGGGTTTGGGGCGTCGGGACGGTGTCCGTGTGGTTCAGTGGACCTGTGACACAGTTGGTCTCGACAGAGATTGTGTAGAAGAGCGTCGACATGGCAAATTAACACAACCCCTTCCTTCTGCCCCAGCTGGAACATCGATCAAAATCTGAGCACAGTGTAATCaggattaaaatgtaaaatcactctaagaaata

Function

GO: NA

KEGG:

id description
K07512 MECR, NRBF1; mitochondrial enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010810 True 1321 mRNA 0.65 8 1126733 1131681

Neighbor

gene id symbol gene type direction distance location
AMCG00010808 LOC106583270,LOC106605111 coding upstream 18373 1105183 ~ 1108360 (+)
AMCG00010812 NA coding upstream 27724 1094122 ~ 1099009 (+)
AMCG00010804 NA coding upstream 85889 1034684 ~ 1040844 (+)
AMCG00010805 mtf1 coding upstream 98143 1012583 ~ 1028590 (+)
AMCG00010803 NA coding upstream 118578 977249 ~ 1008155 (+)
AMCG00010811 ctps1a,LOC108415321,LOC107708718,LOC108433599 coding downstream 8040 1139721 ~ 1147866 (+)
AMCG00010816 LOC108414691,LOC103028730,LOC107689573,LOC105903723,LOC107732921,LOC107595911,LOC107556890,LOC107708721 coding downstream 24976 1156657 ~ 1160427 (+)
AMCG00010814 NA coding downstream 77209 1208890 ~ 1211970 (+)
AMCG00010815 NA coding downstream 116656 1248337 ~ 1255004 (+)
AMCG00010821 NA coding downstream 197198 1328879 ~ 1329908 (+)
G102415 NA non-coding upstream 160528 965961 ~ 966205 (+)
G102396 NA non-coding upstream 319509 806994 ~ 807224 (+)
G102373 NA non-coding upstream 563540 560886 ~ 563193 (+)
G102363 NA non-coding upstream 733680 392730 ~ 393053 (+)
G102361 NA non-coding upstream 838762 287752 ~ 287971 (+)
G102516 NA non-coding downstream 343317 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 386718 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 416129 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 1043115 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 1120422 2252103 ~ 2252470 (+)
AMCG00010809 pdik1l,LOC107690927 other upstream 1547 1046402 ~ 1125186 (+)
G102531 NA other downstream 658507 1790188 ~ 1791723 (+)
G102535 NA other downstream 666759 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 813374 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 907833 2039514 ~ 2064344 (+)
AMCG00010834 NA other downstream 938996 2070677 ~ 2073242 (+)

Expression


Co-expression Network