AMCG00010814


Basic Information

Item Value
gene id AMCG00010814
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1208890 ~ 1211970 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010814
CAACAAGTacagacatacaaacacatcACAAACAACTTTGGAAACAACCTTCTAccccctccgtctctctctctctctctctgtcttactCATACAACAGTGAGGATCACAGCAGGAAAAACTAACGTTCAGTTTCCcttctctctcagacacacacacacaggtattcAGTCACGTAAGGGCGTGGTTTGCAGAAGCTCCGTGGAATTCCTGGCATTCTTGTTTGGCGAGAGGGGGACAGCTCCTCAGCTCCTCGGGTCCCCGGAGAAGCCATGGAGTCCCTGTGGCAGTACCAGTTTCGGATCATCATGCTGGGAGACTCCACGGTGGGCAAGTCATCGCTGCTGAAGAGATACACCGAGGATGTCTTCATCGAATTCATTAACCAGACGGTGGGGGTGGATTTCTACGTGCAGTTTTTCGAGGTGGAGCCGGGGGTGCGGATCAAGCTGCAGTTCTGGGACACCGCCGGGCAGGAGAGGTTCAGGTCAGTGACGCGCTCCTACTACCGCAACTCTGTGGGCGGCCTGCTGGTGTTCGACGTGACCAACCGGGCGTCCTTCGAGCACGTGCGGGACTGGCACGACGAGGTGCAGGAGCGCGTGAAGCCCCAGCAGGTGCTGTTCGTGCTGGTGGGCCACAAGAGCGACCGGGCGGAGGAGCGCACCGTGGGCAGCGAGGAGGCCGAGAAGCTGGCCGGCCAACTGGGAGTTCCCTACATCGAGACGTCGGCCAAGTCCGGCGCCAACGTGGCCGAGGCGTTCGAGCGGCTGACGCGCAGGGTTTACGCGGCGCTGCGCAGCGGGGAGGTGCAGATCCGCCAGGGCTGGGATGGCATCAAGTGCTCGGCCGCCCGCGCCCTGGAGCTCAGCCCCCCGAGGGAGAAGAGCGCCGAGGAGGGCAAGACCTGTGCCTGCTGACGCCCGACTGGTTTCCTGCTCAGAGGTCCCCCTCCCCATGTCTCTCTCCCCGTGTCCCCCTCACGTCTTTGCTGGCCACTGCTCTCGTTGATCTGCCAACTGTGTCTGTTTACAATCAAGGAAAATCCCAAGTGTCTTTAGGGCCTTGTTTATTCCCAGAAGCCCCTGTTCGATCACTCTCAGGCCTGCAAGCTCTACGCGATACTTGGTTCACATGAAAAGACTAACGAATTCACATTTGTATGAAGATGGGAAGTAAACGAATGCAGACACTGAAAAACAGGTACTTTTACTGCCATTCTCCTGGTCTGCTGTGGTGCCCTGGGAATCGGGTCTtctctttaaactttaaaaacaagctCAGTGGTTAGTCAGAGCTTGTGAAGTTAACGACACAGCAAAGAGCaacaagcttttgtttttgaccCCAAGGCAGTTGGACCCTAAagactttttaatatatatattttgaagtgcCTAGTTTGGAAGCACTGGCAGCTTTGACCTCCTACACAATCAATTGGAACGCACCTGTTTGCAGTCGGATGATATGCAACTGTAAAAATAATCGTGCCTTGTCTGTCAGATTTCCAGCACTATGCAATATAAAGGGATGTCTCTGGTGACTTAAACCGGTCTGTTTGCGTGTCTCATTCCCCCGCTGTGCATGCaaatgtgcagtgtgtgtgacagttcCGTTTTGGCCTCTCAACACCGTTACTCTCCACCTAGACTTCAACATATACAACGCC

Function

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0015031 protein transport biological_process
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010814 True 1672 mRNA 0.54 2 1208890 1211970

Neighbor

gene id symbol gene type direction distance location
AMCG00010816 LOC108414691,LOC103028730,LOC107689573,LOC105903723,LOC107732921,LOC107595911,LOC107556890,LOC107708721 coding upstream 48463 1156657 ~ 1160427 (+)
AMCG00010811 ctps1a,LOC108415321,LOC107708718,LOC108433599 coding upstream 61024 1139721 ~ 1147866 (+)
AMCG00010810 NA coding upstream 77209 1126733 ~ 1131681 (+)
AMCG00010808 LOC106583270,LOC106605111 coding upstream 100530 1105183 ~ 1108360 (+)
AMCG00010812 NA coding upstream 109881 1094122 ~ 1099009 (+)
AMCG00010815 NA coding downstream 36367 1248337 ~ 1255004 (+)
AMCG00010821 NA coding downstream 116909 1328879 ~ 1329908 (+)
AMCG00010820 LOC106604982 coding downstream 150927 1362897 ~ 1368868 (+)
AMCG00010822 ptpru coding downstream 167027 1378997 ~ 1418967 (+)
AMCG00010823 ptprub,LOC107705793,LOC107700666,LOC107704844,LOC107755971 coding downstream 216674 1428644 ~ 1452530 (+)
G102415 NA non-coding upstream 242685 965961 ~ 966205 (+)
G102396 NA non-coding upstream 401666 806994 ~ 807224 (+)
G102373 NA non-coding upstream 645697 560886 ~ 563193 (+)
G102363 NA non-coding upstream 815837 392730 ~ 393053 (+)
G102361 NA non-coding upstream 920919 287752 ~ 287971 (+)
G102516 NA non-coding downstream 263028 1474998 ~ 1475210 (+)
G102518 NA non-coding downstream 306429 1518399 ~ 1518698 (+)
G102520 NA non-coding downstream 335840 1547810 ~ 1548180 (+)
G102611 NA non-coding downstream 962826 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 1040133 2252103 ~ 2252470 (+)
AMCG00010809 pdik1l,LOC107690927 other upstream 83704 1046402 ~ 1125186 (+)
G102531 NA other downstream 578218 1790188 ~ 1791723 (+)
G102535 NA other downstream 586470 1798440 ~ 1800751 (+)
AMCG00010830 NA other downstream 733085 1945055 ~ 1963965 (+)
AMCG00010832 NA other downstream 827544 2039514 ~ 2064344 (+)
AMCG00010834 NA other downstream 858707 2070677 ~ 2073242 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location