AMCG00010831


Basic Information

Item Value
gene id AMCG00010831
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 1979619 ~ 1986242 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010831
GGTCAGAGAAGGAGGACTTATAAATACCGGGTAGCAGCAGAGCAGTGCTTCAGACAAACACCTGTCTGCAAAGCCACCGGCTGAGGAGCTCTCACTGTGCACTTCTACACTCAGGATTTACTGAACTCTCCAGCAGCGCTGAACAAAGACATGGCTCTCTCCGTGCATGGACTCCTGGCACTGGCCATTACCCTGGGCACCTCTCTGCAGGAAGGTCTGagtctccctgtgtctgcagACGCTGACCCAAGCCCCCAACCATCTTCCCAGAGAGTCCGGGTCAAACGCTGTTCCTGCAACAACTGGTTGGACACTGAGTGCATCTACTTCTGCCACCTGGACATCATCTGGGTCAATACTCCCAGTAAGACTATACCCTATGGCCTGGGTGCCCCGCCCTCACGCCGCCGCCGCTCGCTGGGCCGGTGTCAGTGCGCCCACGGGGGTGACCAGACCTGCGCAGGCTTCTGCCACTCCAGCACCAGAAACACGGCTCAGCAGAATGGGGGCACGTCCGCACATTCCCCAAACACTGCAGACGCACGCAAACCCAGCTCCCGCCTCCTGTCGGCCTTCAGGGATGCTATCAAGGCCAATGTCAAGGCTGCTGAGCGTGGAATTTCGCCTAAGAAGAAATCATCCAAACTTCAGTGGTGGAATTTGATCCGATAAAGGCAGCAGCCCGGCAAGCCAGAAACAACCATCGGGTGACAGGAAATCATCCCAAGCGAGAGTCTCGACGAAGCTCTCGTGTCGGCCAGCGGGGGCCTGAGACCAGCGAGGAGTCGGGCCCCACACGGCGCTCTGGACTGCGCCTGCTGCGGCAACCCTCCACCGCAGGGATGGGACACTTTAAACAAACTGTTTCAGAACGGGACCGCACTGGACGATTGGGTTTGATTTACTGGACTCTGTCACTGCAGTGGGTCCccagcacagaaaacacagcagcTCCCAGGAGAACGTCTCCGGAATTCCTTCGAGTTCCAAGACTTGTTCGAAGTTCTCGAGCTGAGCTGTCGACGCTTTCTGAAACTCTACCGTAgactgtgggtgtgtgttttcCCCCTCCTCCATTTGCCACGAGGAACAGGGTCCAAAACAGTGTCCCTGTCACTGCTGAATAGGAAGGCAGGAGacattgtgttgtgtacagTAATGGGGAAGGAGATACTCTGTGATATTTGTTAGCTGTGAGGAAAGCGCTGTGGGAATTTAGGAATTGGTAGTGCCTACAGTGAAATACAGACATCTGTACACAGGGAAGAGCGGGTGTAATGCTAACTCACTGACTGGTGTCCTAGAGATCCTCTGAGGCAGGTTATTATGAGATCAGTTTGCTCAATATTCAGCAGCTTCAGTGTGATCACAGGCCAACAGACAACAGCGATTTAAAAGGTCTGTGTCTGATCTTGGGCAACAGAGGACAGAAGGAAAGATTGTTAGAAAATATCCACATTCTCCGCCAACAAGGATCATGACTATAATATTTCAGAAGCTACTTACCTGTGGATATTACTTGAATTACTTGAATGTATTTGAATCATATAGAGGAATATATGCTGTACAAGGAAACACATTAGCCATATGAAGGAATCGTATTTAATGTCAAATCGCTTTTGTCGCAATTCTCAAATGGCCTGCTGCTGCTCTTTATTTCATTGTATATGTTGACTGAAATTATCAGAGGCTCTCAAAAGCTGCTCATTATATTCTGGATTGAATTCCAGGGGGAGATAAGAgttgttattatgatttaatttctttagATGTAgcgatcattaaaaaaaaacacaacccccAGTATTTGATGCTCTTGGTAGAAGTGTGTTGAACATCCaatttcatgttattattacaCGCTTGTACTCAGCATTCAGCAGAAAGATGGGTTGACAGTGTGAGGTCTGCTGTGTGAGAAAGTCAGGTGTGTTTTTGCCCAgggcacaacacaacaccaggGCCATCATTACACATCACAGTTAATGTCAAAGCTGTGTAATCAAGAGCCATTTACAGAGTGGCTATTTATTAggtttgtgtctctgtgccaaTTGACTCGCAGCTGCATTCGACAGCCCGCTACATATCTATCTGCACGCTTTGATGGAGAACGCCCTCCACTGCGAGGAGCTAATTATAAGGGAGAGGCTTTTAAAATTACTTCACACCTTTAAGTACTTCATTCATCACCTTCGGCTTCATAGTTCTAGCCCCGGGATGGGTAATCCTGGATATTAATATAGCGCATGAAACACGGGAGTGAAATCATTTGAAGCCACTCCTGATCCCCCAGCTTTGATGATTGAGTGTTCGGGGTTCAACCTACCTCCCATTTTATACAGTTAGACATGTGGCAGTGCCCATCTGTCCCTGCTGCCTCGGCCTGTAATCTCTCTCGACCCACCGAGGATGAATGTGAGGGCTTTTGTGGCCACGGAAACATCCCGTGCAGGGCTGCAATATCTTGATTGCTCCGAACGGTGGAGAGCCTTCAATGGTAGCAGCCCTgccaaaaagcttttaattgtttttcttgtaatgtttttctttttaattgttccAGCCATATGGAAAAGTCATGTCCTCATTACCcccccaaagaaaaacaaaaagcaaacttgGTGGtggaatgtgtttgttttcgaAAGCAGCATTCTTCTACAGGGGACAGCATTcagggtttttttgtttgttgttcaagTTCCTGAAATTGTACTGGAATGTCAAGTGCGTTGCATATTTGTGCTTTTTAATCTCAGTGTTATTTATTGAGTGTGTTCATTACTGCTGTCTGTTCAAGGCGTGCGTTTTCAAGGAGCAAACAAGGAGTCTTTAAAGACATTGATTTAGAGCAGATACTCTATCAGAGTTTTCTCATTCATTTCACTCGTTTGATGTATTGATGCCAATGAAGTCctgctgatatttattttatttatataatggaTTCTGATTTATTCTTGTTTCTATTCATAATGTGTCGATGTATTACTCATGACAAGGTGTTtgattataataaatgtatttaattgtaaca

Function

GO: NA

KEGG:

id description
K16367 EDN2; endothelin-2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010831 True 3040 mRNA 0.47 5 1979619 1986242

Neighbor

gene id symbol gene type direction distance location
AMCG00010826 LOC103361910,LOC100710164,LOC106570256,LOC105009339 coding upstream 120194 1850784 ~ 1859425 (+)
AMCG00010825 NA coding upstream 519630 1458829 ~ 1459989 (+)
AMCG00010824 NA coding upstream 521890 1457490 ~ 1457729 (+)
AMCG00010823 ptprub,LOC107705793,LOC107700666,LOC107704844,LOC107755971 coding upstream 527089 1428644 ~ 1452530 (+)
AMCG00010822 ptpru coding upstream 560652 1378997 ~ 1418967 (+)
AMCG00010833 rcc1,LOC107700729,LOC107735284 coding downstream 81423 2067665 ~ 2069500 (+)
AMCG00010837 NA coding downstream 372271 2358513 ~ 2363722 (+)
AMCG00010838 NA coding downstream 377968 2364210 ~ 2368559 (+)
AMCG00010847 LOC106588610,LOC105012636,LOC108411273,LOC107700831,LOC104926085,LOC103368849 coding downstream 623031 2609273 ~ 2615203 (+)
AMCG00010846 NA coding downstream 656131 2642373 ~ 2644326 (+)
G102520 NA non-coding upstream 431439 1547810 ~ 1548180 (+)
G102518 NA non-coding upstream 460921 1518399 ~ 1518698 (+)
G102516 NA non-coding upstream 504409 1474998 ~ 1475210 (+)
G102415 NA non-coding upstream 1013414 965961 ~ 966205 (+)
G102396 NA non-coding upstream 1172395 806994 ~ 807224 (+)
G102611 NA non-coding downstream 188554 2174796 ~ 2175064 (+)
G102622 NA non-coding downstream 265861 2252103 ~ 2252470 (+)
G102628 NA non-coding downstream 330695 2316937 ~ 2317570 (+)
G102655 NA non-coding downstream 462958 2449200 ~ 2449881 (+)
G102693 NA non-coding downstream 637364 2623606 ~ 2660858 (+)
AMCG00010830 NA other upstream 15654 1945055 ~ 1963965 (+)
G102535 NA other upstream 178868 1798440 ~ 1800751 (+)
G102531 NA other upstream 187896 1790188 ~ 1791723 (+)
AMCG00010809 pdik1l,LOC107690927 other upstream 854433 1046402 ~ 1125186 (+)
AMCG00010832 NA other downstream 53272 2039514 ~ 2064344 (+)
AMCG00010834 NA other downstream 84435 2070677 ~ 2073242 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other downstream 770054 2756296 ~ 2762226 (+)
AMCG00010856 NA other downstream 782898 2769140 ~ 2778033 (+)
AMCG00010884 NA other downstream 1315714 3301956 ~ 3310953 (+)

Expression


Co-expression Network