AMCG00010838


Basic Information

Item Value
gene id AMCG00010838
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2364210 ~ 2368559 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010838
ATGTCCAAGTGTGGCCTGTTTGTGcctgCTAGCAGGACATCCCTGATCCCAGAGAGCTGCATCCCCAATGATGCAGGCGACGCGCTGGTCCACACGGAGAGTGTTGTCACTCTGTCCTCCCCGCGGTTTCCACACTCGTTGCACAGCACAAAGGTGGTCATGGGCTCGTCAGCGCTGCGCGTCTGCACCTGCACACAGAGATGGAGGAGACGCGCgtcacacaccacacacactccccGTCACTGGCTCAACACGGTCATCACAACAAGGAAGACTTGTCCGTCTGAGGAGGCGCTGCTCTACCCTGTGGCAGCTGGGGACCGAAACCAGGAGGAGGAACGACCGGAAACACGGCAGCAAAGGGGCTTCTGCCTGCATGCTGACAGGTCAGGAAAATTAACTCGGCACTTTGCGCGCAACGCAAGCAGTGCCAGCTCCGGCAGTTTTGCCGCAGGGCGGACGGTGTGCCGCTGTGGGCCACAGGCTGACCTGGTTGTAGGTGCAGTTCTTCTTCCGGCACTTGCCGCACTGCAGCAGGTCTGTGGTGGTGCCGCCCGTCTTGGCCATCTGGTGCTCCCGAATGGCCTCCTGCGTCAGGACGTTGCGCAGCTGCTTCAGCTCGGCACTGGCCATCTCCTGCGTGTggagagagagcgcgagagcgaaagcgagagcgagagaaggGAGTTAACCTCGACAATGCACCCAGACACACACGACCCACCTAGTCACGCTAGCACATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010838 True 744 mRNA 0.61 5 2364210 2368559

Neighbor

gene id symbol gene type direction distance location
AMCG00010837 NA coding upstream 488 2358513 ~ 2363722 (+)
AMCG00010833 rcc1,LOC107700729,LOC107735284 coding upstream 294710 2067665 ~ 2069500 (+)
AMCG00010831 NA coding upstream 377968 1979619 ~ 1986242 (+)
AMCG00010826 LOC103361910,LOC100710164,LOC106570256,LOC105009339 coding upstream 504785 1850784 ~ 1859425 (+)
AMCG00010825 NA coding upstream 904221 1458829 ~ 1459989 (+)
AMCG00010847 LOC106588610,LOC105012636,LOC108411273,LOC107700831,LOC104926085,LOC103368849 coding downstream 240714 2609273 ~ 2615203 (+)
AMCG00010846 NA coding downstream 273814 2642373 ~ 2644326 (+)
AMCG00010853 NA coding downstream 362471 2731030 ~ 2732094 (+)
AMCG00010855 NA coding downstream 377195 2745754 ~ 2753993 (+)
AMCG00010862 NA coding downstream 413015 2781574 ~ 2786898 (+)
G102628 NA non-coding upstream 46640 2316937 ~ 2317570 (+)
G102622 NA non-coding upstream 111740 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 189146 2174796 ~ 2175064 (+)
G102520 NA non-coding upstream 816030 1547810 ~ 1548180 (+)
G102518 NA non-coding upstream 845512 1518399 ~ 1518698 (+)
G102655 NA non-coding downstream 80641 2449200 ~ 2449881 (+)
G102693 NA non-coding downstream 255047 2623606 ~ 2660858 (+)
G102843 NA non-coding downstream 658509 3027068 ~ 3027397 (+)
G102859 NA non-coding downstream 725375 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 731362 3099921 ~ 3103642 (+)
AMCG00010834 NA other upstream 290968 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 299866 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 400245 1945055 ~ 1963965 (+)
G102535 NA other upstream 563459 1798440 ~ 1800751 (+)
G102531 NA other upstream 572487 1790188 ~ 1791723 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other downstream 387737 2756296 ~ 2762226 (+)
AMCG00010856 NA other downstream 400581 2769140 ~ 2778033 (+)
AMCG00010884 NA other downstream 933397 3301956 ~ 3310953 (+)
G102921 NA other downstream 963025 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 963160 3331719 ~ 3338416 (+)

Expression


Co-expression Network