AMCG00010840



Basic Information


Item Value
gene id AMCG00010840
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2332216 ~ 2336743 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00010840
GACCATGTGAAGTAAATGCAATGGTTGTTAACCCAACTGGTCCGAATCCATGCCgtgattttttttacaataatattgAACCTGTTTTGGGAGGATTGCAGAATCCTGTAAGAATCTGCCAGATCCACAATAATACACCTCGGTTTGCCACATTGTATGACAGATTAAGGCGTATGCCAGCGTACTCTGCTTATATATTCAACGCGAAAACATCAAGCTGTCAGCCAGATCGACTAAGTACCTGGTTTATTGAACCACAGcttGCAGATAACAATTGGATTGGAGAGTCAATGACAGTAAATTACCTGTACCAGCAATTGGGAAATAAACCAGAAAAGACTGTTTTCAAGCAAAAGATTTTTGATAGTCAAGCAACCAATTGCGATTATGAAGACTCTGGCTTTGACCGAGGACACCTCAATCCCAACTGCCATCAAGATGGTGAAGGCCGTACTGCTACCTTCACTCTAACCAATGCAGTGCCGATGTATGAGGATTTCAATCGTAAAATTTGGTACTCGCAATATGAAAACATTGTAAACAATGAACTTAAAAAGAACTGCACATCACCTAGTATTGGGTACATTGTGGTTGGTGCTGTTAGTTCTCAGACTATTGTCAATAATCGTCTTTATGTGCCCTCTTTAATATGGGcagctgtgtgctgtcactctgTTAAAAATTCATTTAGTTTGGCTTTTTGGGCAGATCATTACCCACGTCCTCAACAATATAAACGAGGAGGTGTGTGTCGGCCCTGCTGGGGTCAGAGAGGGGCGCGCGTCTCACAGCAGGAACAACATCGAGGAGCGATAAATCAGGAGTGGAAGAGTATGCACGCCTCGTGGACGGAGCTGCTGCCGAGACAGCTCCCTTCTCCTCACAAGCTCAGCAATCAAACTGATAAGGAAACCCCTGCAACTGCAAGAGAATTCATCCTT

Function


GO: NA

KEGG:

id description
K15049 ENDOD1; endonuclease domain-containing 1 protein

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00010840 True 941 mRNA 0.44 3 2332216 2336743

Neighbor


gene id symbol gene type direction distance location
AMCG00010835 oprd1a,LOC108411271,LOC107595906,LOC107732912 coding downstream 149744 2180504 ~ 2182472 (-)
AMCG00010836 NA coding downstream 151719 2143118 ~ 2180497 (-)
AMCG00010827 pkib,LOC105417165,LOC107098269,LOC107374466 coding downstream 495331 1821651 ~ 1836885 (-)
AMCG00010829 stmn1,LOC107587743,LOC104924882,LOC103040240,LOC107700727,LOC107597104 coding downstream 531456 1798219 ~ 1800760 (-)
AMCG00010828 NA coding downstream 535624 1792777 ~ 1796592 (-)
AMCG00010839 NA coding upstream 28730 2365473 ~ 2382245 (-)
AMCG00010841 fam46ba,LOC107597110,LOC108443429,LOC107587747,LOC107734389,LOC107704962,LOC107700733 coding upstream 105484 2442227 ~ 2449554 (-)
AMCG00010842 NA coding upstream 163062 2499805 ~ 2502500 (-)
AMCG00010844 arid1a,LOC106588635 coding upstream 169977 2506720 ~ 2519791 (-)
AMCG00010845 NA coding upstream 200455 2537198 ~ 2539438 (-)
G102629 NA non-coding downstream 14952 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 79749 2252119 ~ 2252467 (-)
G102615 NA non-coding downstream 154700 2177276 ~ 2177516 (-)
G102609 NA non-coding downstream 160415 2171530 ~ 2171801 (-)
G102572 NA non-coding downstream 368263 1962282 ~ 1963953 (-)
G102639 NA non-coding upstream 26137 2362880 ~ 2363110 (-)
G102651 NA non-coding upstream 49980 2386723 ~ 2437698 (-)
G102725 NA non-coding upstream 337820 2674563 ~ 2675136 (-)
G102785 NA non-coding upstream 452727 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 618017 2954760 ~ 2954975 (-)
AMCG00010806 NA other downstream 1297342 1033830 ~ 1034874 (-)
G102434 NA other downstream 1354089 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2182387 136369 ~ 149829 (-)
AMCG00010843 NA other upstream 145131 2481874 ~ 2496446 (-)
G102762 NA other upstream 403073 2739816 ~ 2778023 (-)
G102774 NA other upstream 421735 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 843227 3179970 ~ 3182619 (-)
G102990 NA other upstream 984070 3320813 ~ 3419176 (-)

Expression



Co-expression Network