AMCG00010848


Basic Information

Item Value
gene id AMCG00010848
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2649261 ~ 2661858 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010848
CTCCTATAACAACGAATTACATTGCAGCGCAAAACGTCTTCTTGGGGGAGCTGTCGCCTCAGGTATCGCACGGAGCAGCACCGGCCGACTTCCGCAGCCACCGGACGCGAACCGGACTGGGCGGCCCAACCGGACAGCCACCGGCGCAGCGCAGAGCCACCGGCGCCCCCGATTCTCCGCGCCCGAGCGGCAAGGTCAGCGGATCTCAGCGGTCAAAACACGGGGCATTAACGCGGAGAGAGGAAGACTACAACCCGACTTCCGGAGTTTGggatttgaaaaacacaacaacaacaggcgGAACAGAAAGCAGCCCCGTCCTGTGCGGCCTGGGATTCGGTGAGCCATGCCTGGCAACAGTGCAGGGAGCCATCAGAAACCCCACTACCAGGGCCAGCACAAGGGCAGGCATGCGGGCGAGGGCTACAGGCAGGCGGGGGAGGGCACCAGGCAGACGAGACCGGTCTCCAGGGACAGCAGCCTTAGCCAGGAGATTCACAAGGACAGCTCCCCGGATCAGAAGGGCACCAGGAGGTCTGCGCCCCAGCCGGCCAGGAAAGCTCTCGCCCGGGATGCCAACGGGAGGGAATCGGAGACCATCGGCTTCATCCCGGGCTCAGCCGACAACCCTCCTGGCGCCCAGAGCTGCGGCGCCTGCAGCTCAGTGGGCTGGCGCAGCTGCGGCGCCCTGATCTGCTGCATGGTCACCTGCGGCTTCTACAAGGCCGAGACCCCGGTGTGCGTGCCCTGCCTGGCCCACGCCGAGACCTCCACCGAAGACGTGAAGGTGGTGCCGGAGCCGAAGCACTCCAACGGGTTGGCCCTGTCCAATCCCACCTGCGGCGTCCCCCTGGAGAGCCGCCCCCACAAGTCCCCGCTCACAGAGAGCTTCACCTACACCGACATCAAGATCAAGGGCGAGCGGGTGGCCCTCGCCTCAGAGGGGGTGCGCCGGCACGGCCATGCCTACGCGGCCCCCAAGCGCACGCCATCCTCCAAGTCCATCCAGAAGGGGGACGGCCTGCGCCCCATCAGCTACACCAGCTGCTACTCCCTGGAGGACCCCGACCAGTTCCTGGACGACCTGCCTGACAGTGGCACGGACATCGACTCGCTGATCACCAGGAAGCTGCTGGAGCTGTACAAGCTGCACCAGATCGACCAGCTGGCCAAGTGCACCTCAGACTCGGTCTTCTTCCGCAAGACCAGCGAGATCGCCGAGCTCATCAACAACATCGCCCAGGACTACAACCTGGATGAGCAGGACGCCGAGTGCCGGCTGGTGCACGGCGTGATCCGCATCAGCACCCGCAAGAGCAAGAGGCCCAAGCCCGACCCGGCCCATGCCTCAGTCAGCCACAGCCATGACTCTGGCCCCCGGGTGGAGGAGCGCAGCCGGAGGAACGGGACCCTGCCCGACAGCGGCAACGACACCATGATCGAGACCACCCTGACCAGCCAGGACACTGACCTGGACGTCCAGATATCGGAACAGACGCCTTCAGATAAACTTGCGAGACAAATGAGGCACAACAGCACTAAAGTTTACTCCTCGGGCTCATCCGCCGCACACTACACCTGCCCCCCAGACAGCGAGACCCTCTCCTCCGGGACCCCCCTGCTGGAGAAATTCTACCGAACATGAAGCTCGGGAGGAGTTGGCGGGGAGCATCGTGCCACGGCCCCTCTTGCACACTGCCACGGATGccggggggagggagggagggagggaggaaggaagaGACCCATTCCAATAAGCCAAGCTTTCtgcatagaaaaacaaaaacgttattttttccttccattCATTGAGAGGATCTGAAACGCCTTCGTGCTTCTATTACTCTGTAAACGATGCCTGCAGCACTGGGGGCTGCTAATGAGCGCTGGTTCCTGGAGTCTCTGCCGCTCGCCAGCTGGGGGGGCCGAGGGAGACGTGGTGTGTACGCGCCTCCTGCACgcaagaaagaagaaaaataaaggtcTAGGTCTGCAGTAGAGATCCTCTGGGATGGATTTTGACTGGATTCTGGGAAAACGGTTTTAAAAGAGATccctccttcccctcctcctctggctttttattttgtatacgaTTCTGCTCTGTGGACGCGTCTCTAATTCCCTTTGCTCTAACTTGGGCCCAGCTGATGTCCGCCGTGCCGGCTGTGGTGTCGGTGTTTTGTGGACAGTGGGAGGACAGATCTGGACTTCACGGGGAAAGCTCGTCTCGTTTCTGGTTTCGTTTTGTTGCGCCGGCCGACGACGCTGTCTGCCAAAATCGACGGAGTTGTTGACTTGAGCCAGACGCCCGCCAGGGGACAGTAGCGACCTGGAGTGAACACCTCTGGGTCCCTCTGTCgtcttgtgtttttatctgtattaATGCGCTGCTGTACCGGACCCGGGGCAAACCCAACCTCTGCTCCTTTGGGTGTgaggatttgttttctctttccgTCGCAGGCCCCCTTCTTCCGGGGTTGTTTGGACAGATCTTAAAAAAAGGGATGATTCTATCTGGGGAATACTGgtatgcttgtttttgttttgtttagttttattttcatgttttttctttaaataaataaatggaaacggCTGCTTTGCGTTTTTCGCAAGTCGCCCTGCCTTGTGACACCAAATGTGCGCCGTTTAAATGCCACACGAAATCAGATCAAAACGACGAGCGCTGGCGAGTCCCACTCCGAGTCGCACTGCGATCGTGGGTTACTCTGTCATCTGGATGTCTTGCTGAAAGAAAAAGTTATTGACCAGTGAAGTGTCTGAAGCTTCGCCGTGCatgaatttgtttaaatgtttgtcttAGACTGTTAAAGGGCTTTTGGTTAcctacaaaaaaagaaaataagtccTAACATGAGTCGGGACACTTGCTTAATCGGGTGTGTTGCCCTTTTTATTTAGTTCTACTGTGAATAAAGTAAGGGCAGCCAAtcgttttttatttacaatgtataaAAAGTGGGTTttactacaattaaaataatacttttttttcctgtgtgtccCAGAGCAGTGAAATTAGTGTCTGTAGAGGGAAtgcaaatatttgtgtgtgtggagactAAAAAGAGATTGTTtgcagtcttgttttttttttggtggtggc

Function

GO: NA

KEGG:

id description
K23346 KDF1; keratinocyte differentiation factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010848 True 3133 mRNA 0.56 5 2649261 2661858

Neighbor

gene id symbol gene type direction distance location
AMCG00010849 nudc,LOC107737783,LOC107580217,LOC104951062 coding downstream 11206 2630474 ~ 2638055 (-)
AMCG00010850 NA coding downstream 20744 2625003 ~ 2628517 (-)
AMCG00010852 gpn2 coding downstream 25933 2619961 ~ 2623328 (-)
AMCG00010845 NA coding downstream 109823 2537198 ~ 2539438 (-)
AMCG00010844 arid1a,LOC106588635 coding downstream 129470 2506720 ~ 2519791 (-)
AMCG00010851 NA coding upstream 25208 2687066 ~ 2689410 (-)
AMCG00010857 tmem222,LOC103368846,LOC106570241 coding upstream 32547 2694405 ~ 2706621 (-)
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding upstream 50669 2712527 ~ 2723800 (-)
AMCG00010859 NA coding upstream 100668 2762526 ~ 2767269 (-)
AMCG00010867 NA coding upstream 282337 2944195 ~ 2945511 (-)
G102651 NA non-coding downstream 211563 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 286151 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 331997 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 396794 2252119 ~ 2252467 (-)
G102615 NA non-coding downstream 471745 2177276 ~ 2177516 (-)
G102725 NA non-coding upstream 12705 2674563 ~ 2675136 (-)
G102785 NA non-coding upstream 127612 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 292902 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 328789 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 483406 3145264 ~ 3145687 (-)
AMCG00010843 NA other downstream 152815 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1614387 1033830 ~ 1034874 (-)
G102434 NA other downstream 1671134 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2499432 136369 ~ 149829 (-)
G102762 NA other upstream 77958 2739816 ~ 2778023 (-)
G102774 NA other upstream 96620 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 518112 3179970 ~ 3182619 (-)
G102990 NA other upstream 658955 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 659518 3321376 ~ 3327559 (-)

Expression


Co-expression Network