AMCG00010850


Basic Information

Item Value
gene id AMCG00010850
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2625003 ~ 2628517 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010850
ATGGCGGACGCTGGTGTTGTTTACATCGCGGTGAGCAACATCCCGGCCCAATTCCGCTCCTCGGACCTGCGGAACTATTTCAGCCAGTTCATCGAGGGGGGCGGGTTCGTGTGTTTCCACTACCGACACCGGCCCGAAGTGCTCCGAGCCCCCGGGGACACTGTGCCGCAGAGGGGACAGTCCAGGGAGCCGCCCGGGTGTCCGCAGAGCCATGACGCCGGGGGAGGGAGCTCGGGGACGGAGGGCTCCACCGAGCGAGTCGCCCCTCCGAGCAGCCAAGAGACCCGCTGTTGCGTGGTGGCCGTCCGGGCAGGGGAAGCGGACCGTTTGGTGAAGATGTACGCCGGGAACCAGTGGGTGGACGCGGACGGGAGCTGGCTCGGCAGCCGCTGTGTGATTCGGAAGATCAGCGTGTCGGATCAGTCGgACGTGAACGAGTTTCCCTACAAGACGAAGGCGCAGCAGCGGCGCCGGGTGGCCGCGAGCGAACGCTTCACCGAGGGCGACCTGAAGACGCTGCCCGAGATGAACCCCCCGGCCCTGATGCCCAACGGCAACGTGGGCACCCCGGTCACCGTCTTCCTGCAGCTGATCCAGGCCTGCCGGCTGCCCCCCAGGCTCATCCGCCAACTGGGCCTCAGCTTCCCCAAGACGGGCTCCCGGCGCCGCTACGGCAATGTGCCCTTCGAGTACCGCAACACGTGCACCCTGAGGCCCCAGCAGGAGAGTGTGTACACTGCGGGCGGCGTGGAGCTCTCCGGGGCGGGGGAGGGCAGCCCTGTACGGGGCAGCCAGGAGACCCCAGAGTCTGGCCCGGCTCAGGAAACCCCCGTGAGCGAGAGAGATGGGCCCAACTCCAACTCGGACGATGACGATGACACGTGTGAGGAGTGGGAGCGACACGAGGCCCTGAGCGAGGACGTGACGTGGCAGGACCGCTGCGAGGAGCGGCTGTTCGAGGAGCGGATCGAGCTCAAGTGGGAGAAGGGCGGCTCGGGCCTGGTCTTCTACACCGACGCGCAGTACTGGAAGGAGGAGCAGGGAGATTTCGACGAGCAGACGTCGGACGACTGGGACGTGGATATGAGCGTCTACTACGACAAAGaTGGGGGCGATAAAGACGCGCGTGATTACATCCGCATGCGCCACGAGCAGAGGCTGCGGGCCGGGCTGGAGTCGGGGTCTTTGCTGGGCCCACGCATCGGCGGCTTCGAGAAGTTCACCAAGGGGGTCGGCCGACGGCTGATGGAGCAGCAGGGCTGGAGGGAGGGTCAGGGGCTTGGCCACAGCCGGCCCGGGATAGCGGAGGCCCTGGAGAGCGAGGGCCAGCACCCCAACTGCAAGAGGGGATTCGGgTACCACGGGGAGAAGATCAGCTCGTTCCTCCCGGTGAAGAAGCCTCGTCCCGACTTCCTCATCTCCACGGTGTACGACCAGCCCAGGGAGGAGGACTCCGGGGACTCCCTGTTGAGGAGACAGCAAACCACCAGCATGAAGTACCGGCACTGGCAGCCAGGGGGCAGAAGATAGACACTCAGCAGGATCCTCTGCACGTTGTGCTGGagctgactgtgtgtgtgtgtgactgtgtgtgtgtgtgtgtgggtgtgtgtgactgtgactgtgtgggtgtgtgactgtgtgactgtgtgtgtgtgtgtgtgtgactgtgactgtgtgtgtgtgtgtgtgtgtgtgactgtgtgtctgtgtgtgtgtgtgtgtgactgtgggtgtgtgtgtgactgtgactgtgtgtctgtgtgtgtgactgtgtgtgtgtgtgtgtgtgactgtgactgtgtgtctgtgtctgtgtgggtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgactgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
ko04137 Mitophagy - animal

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010850 True 1883 mRNA 0.64 7 2625003 2628517

Neighbor

gene id symbol gene type direction distance location
AMCG00010852 gpn2 coding downstream 1675 2619961 ~ 2623328 (-)
AMCG00010845 NA coding downstream 85565 2537198 ~ 2539438 (-)
AMCG00010844 arid1a,LOC106588635 coding downstream 105212 2506720 ~ 2519791 (-)
AMCG00010842 NA coding downstream 122503 2499805 ~ 2502500 (-)
AMCG00010841 fam46ba,LOC107597110,LOC108443429,LOC107587747,LOC107734389,LOC107704962,LOC107700733 coding downstream 175449 2442227 ~ 2449554 (-)
AMCG00010849 nudc,LOC107737783,LOC107580217,LOC104951062 coding upstream 1957 2630474 ~ 2638055 (-)
AMCG00010848 NA coding upstream 20744 2649261 ~ 2661858 (-)
AMCG00010851 NA coding upstream 58549 2687066 ~ 2689410 (-)
AMCG00010857 tmem222,LOC103368846,LOC106570241 coding upstream 65888 2694405 ~ 2706621 (-)
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding upstream 84010 2712527 ~ 2723800 (-)
G102651 NA non-coding downstream 187305 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 261893 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 307739 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 372536 2252119 ~ 2252467 (-)
G102615 NA non-coding downstream 447487 2177276 ~ 2177516 (-)
G102725 NA non-coding upstream 46046 2674563 ~ 2675136 (-)
G102785 NA non-coding upstream 160953 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 326243 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 362130 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 516747 3145264 ~ 3145687 (-)
AMCG00010843 NA other downstream 128557 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1590129 1033830 ~ 1034874 (-)
G102434 NA other downstream 1646876 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2475174 136369 ~ 149829 (-)
G102762 NA other upstream 111299 2739816 ~ 2778023 (-)
G102774 NA other upstream 129961 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 551453 3179970 ~ 3182619 (-)
G102990 NA other upstream 692296 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 692859 3321376 ~ 3327559 (-)

Expression


Co-expression Network