AMCG00010857 (tmem222,LOC103368846,LOC106570241)


Basic Information

Item Value
gene id AMCG00010857
gene name tmem222,LOC103368846,LOC106570241
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2694405 ~ 2706621 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010857
CACAGAAAATATAATCACAGGCACATTTTGTTCAAACATGCTCACTACTCAAGCGTGTTATATTGGAGTCTGGAGCCTCATATAGTGTGATTGCTGCACTGtgtgtttcatttcagtttctatGCTCTAGTGCTGTCCATATGTTATAACAGACTATATCTGTACACACCCTGGTGCCCAGGGACTGATCGTCACATCTGCCTAATGCGAGCACGGCGGGGCGGGACTGGCCGGATCCCGGAAGCGGAATGACAGGAGTGTCATTAGTTATGGCGGATGTGGTCGAACCGGACACCATGAAGAATTTCCACGGCAGTTTCGAGAGGATAGACCTGGATATGTGCCGCTTCCCCTACTGCATCGTGTGGACCCCCATCCCGGTGCTGTCGTGGCTCCTACCGTTCATTGGGCACATGGGGATCTGCACGTCCAGTGGTGTGATCCGGGACTTTGCTGGGCCCTACTTCGTCTCTGAAGACAACATGGCCTTCGGGAGACCCACAAAGTACTGGAAGTTGGACGTGAACAAAGTGTACGCCAGCGGCTCCAGCGCCTGGGACACGGCGGTGCACGACGCCTCGGAGGAGTACAAGCACAGGATGCATAACCTGTGCTGCGACAACTGCCACTCCCACGTGGCCATGGCCCTGAACCTCATGCGCTACGACAACAGCACCTCCTGGAACATGGTGAAGCTGTGCGTCCTGTCCCTCGTCTACAGCAAGCACGTAAGTTGCGCCGGTTTTCTGAAGACCTGGCTGCCCTTCTTCATGCTGGCCGGGATCGTGCTGACCGTCAGCCTGGCCCTGAACCTGCGGTGACTGACGGAGGCCCAGAGAGCACGGGACGGGACGGGTGGGGCCGCGGGGGCCTCTGTAGGGAACAACATGGAATTGAGAAACAATACTGACAAAATCTTTGGTGTCGTAGAGAAAAAACACTACCCCCTTCAGAAGTGACTCTTTATAACTTTCCGAagtgttgtgtttgtgattttggccttttttttttgttctccgCTTAACTATAGTCTGCCTCTCTAATTAAAATCGAGAGACGCTAGTTGTAAGACGACGGAACCCGATCTGATCGATCCGACTCGACAAGATATGAGATTGCGGATTGGACACGTCTGTGTTTCTACACGCTGTACAAAGGGATCgcttcctttttgtgtttttgttgtcgtttCTTTATGGAAGACGCAAGAACGAAGCGCTGGATGGGATGTGAGGCTGGCGGGATGAGCATATTCCCGCAGTTCTGGTTTTAAGTCCACAGTTTGGGCATcttctttatttcctttcttctgATGGGTGTTGAAATAATCCATATGCCATTTTTGCCTTGAAGTCATTGCTTGTCTTATTCCTTTGTTTCTACCATCCATTTCTCCTTGGGAACAGGcagatgtgtgtttatatatatataaaccaaaatGTTTAGGCCTATGTGTTGTGTTAGATGTAGTCCAGCAAAAGCAGCCAGTTCTGTGTcttcatgtgtgtgttgtttgtatggttcatttgtttttgtttaagtgtAAATTGATTCCAAGCACTCCCTTTAACTCATCTGGTTGTATTTGGACGCTCCCACCGGTCATATTTCTGACCAGATCCAAGCCTCTGAACAAGTGTTCTCAAAGCTGAGCAGCTCTCCTCGGTGTCTGTCGGGCCCGGCTGCTTGTAGAGGCGGCATCAGCGAGGCGACGGCTCTGGCCCACAGCAGGGGACGTGTGCGGCATACGAGTGGAGATCCGGGCTGTTTCAGCGGTGACAGGGCCCTGTGTGTCGTGCCAAGAGCAGAGTAACGCAAGGCAGTGAGGTCTAGACGTGTGCGTCAACACAACATCACGGGAATTATCCAGGTCCTGCCAAGCCGGTTAGACCGTGACCTTGACTCCCCAAGGATGGATCTGAGGTCGGTGGGAAGATGGAAGCTGCACTGTTTTCACAAAACCTTTAAAacgaacaaaataaaaaacgggAACATTATTATCCAAAATATCCACTGCTTGTCTCTCGCAGATTTGAAGGCCCCGTCCTCTGCCAGCAGACCCAGAAGCTGGATGTTTGTCCTCGGCCAAGCTGCATCTCGAGGGCTTCTGCTGGGCTTCTACTTTCACACGGTGGCCGGGGCTCTCGATGATGACAAACCctttaatgataacaataatggTCACACTTTGCACTCCGATGGGATGCTAACAatctttgttttgtgcttttgtctGCTTGTGTGTTCGCTGGCTTCCGTGTCTTtattaaaggaatattttgatCACTCGCTTCACAAAGATGGGGCCTCAGACTGGGCTTTGATCGGGGGTGTAGTTTAGCCTTCTGTCTGGCCGGCATATGACCTTTTGACACAATCGCCGTTGCAGGGACATCTCTCTCACACCCCCGCCTCTGCCTCCGTGACACATTTGACCCCTGTGTTGTTGAGCATCAAACAGAAATCCGCCGGCCTTCCCTCTCCCAGCAGAGACCCCCTGGTCAGCAGGTCGTGTCTTCAGGTCTGGCGCTTCTCCTCGGCCCCCGAAACGGCGACAACAATAGGCTGCATCTGTAAAAAGTGCCAACAGGGAAGTTTGcctttttagttatttttttgtatgtagttttttctcggtttctttttctttttgtgtgttaatgCACCGCCTGGCCGTTTGAATTGATCTGATTGGTGTTTCTAACTCTGCCGCATGCGCTGGTCTCTGTTGTGCATGGTTTTCGGTCAGCGCTGATGGGAAGGGTTCGATTCGGATCTCGGCAGGGGCCTTTATAGCGCCTTCACCGCAGACCCGTGCTGCCCACATACTCTGATATTCTGTCTGAGCTTGACTTTTTAAAAGGACCTGTGTAATCAAGTGATCACTTCtttaagtgaatttatagtTTATATAGTAACAAGAATGTATATAGTAACGGTACTGATTTAGTCACTGGAATATTACAGGgtttcttaacttttttttattcaatgaaGCACCTTTTTAATGTGCACTCCTCTGCCGATTGCAATACTAGCAATATGTCAATCCTGagaatttacaaaacaatcctttttttatttgcaatcgATGCTTCTGTACAAAGCTGCGTCTGGTGCAAAGTGATTCCCTGCCCTCCCGCCCCACCCTACCCACACTTCTAGAGATCTTGCATATTGAGCCAGAGCAGATCGAAAGCATCGCAAGCTGGCTGGTGCACCCCTGTCACGGGCACAGTGGCCTCGTCTCTGCTTCAGTGAGAAAACGACTACACCGGGGAGGACGGGCGAGACGCAGCTTTAATTGTGCTCTCCTGTCCCCCCTGTGTGTCCTCCAGGGAAGCGAGCCAGGACAGTCCCATTGTCTACTGAAGAACACCAATCACAATCTTCCCAATAGGTCTTtcgtaaagtaaagtaaagtcaAATCTTCCGCTTGTTTACAGTCCTGTGAGGCCAGTGAAGCGTTTCCACCTATCAACTGTGCTttctgattgattaattgaagaagaaaaaaatatataaccagGGATCAGACTGATAACCCTACCGCTCTGGAAATGGGAAGAGGACACCCTGAAGCCCATGCaatgacaatatttatttttattggaagTTTGAATGTAATCTGCGACCCGCAGTGACCTCCGAATACAACACTGGgcaggaagtgatgtcattaTTCGAGTGAGCCAAATTAATGAAGGTCTCTCATTGTGCGGGAAGCTgcccattttgtttattttactgtgtgtCTTTTGACAGATGGAAATGGCTTGTTTGATCAGATTGTGTCCTGAATGTCCTCTTGAGTGGTGGTGGACAAAAGCAATATTGCTCTCTGTGGTGCAGTGGGATCAGAGCGTGCAAACAGAGCGCACCCCCAGCTTGTCGCGTTCGATTGTGCAGTCCCAGCGGCTCATGTCACATGTCAATAGGTAATCCTAACGAGCAATAAAGATGGACATCTGACTAAACACGAGTTATACAAGATCATTCACCGCATTCAAACAATGTTTACTCTCTGACTGAGGCGATTGTTGTGAGCCCTACAAAAGAGCCTATTCCAAATGCAAACTTTTGTCCATATTTCACATTCATGACGAGCATAAGAACGGCTGCGGAATACATTCGTGTGTGTACTTAATCTCCTAAGTGGTGGCTCTTTCTGCATTGTGTCTGGTGCTACAGCCGCTCCTCTTACAAAGTGAACAATTATGACCGTTCACTTTAGGGAGAGAAAATATTAGGATTGATTACTGCTACTGGATCAGTGTGTAATCGCATCAGATCCTGTGGCGATCGATCGGCGAGTCTGGCCGGCCAAGGTCGTCTGGGCCAGCTTCTAACGAAGGGGCTGTAATTAGTGGGGGCTGTGTCGGTCCTTTGCCGTTTGCGATCTGGACTTTTAGTGTGAAGAGTAACTGCTGCAAAAGGatgcactttgtttttatacacaaaatgGCTTCAATATAGCATTAAGGGCATTGATTAAGGTCTCTGTAGTTCGCACGTTCTACATCTTCAGTTATAAATTCCTGGCACAATCGTTTCTTGAtgtactaaataataataattaagctggagttgtttttttgaaatattgtaaataaggTTGTTAAATTCCAGACCAATTGAATTCAAGGACACCAAGTTCAGGGGTTATAATGCAGCCTGAGATGGGTGCCGGTTTGTTTTGGTTCgttttggttcattttctacGCGCCCAATATCCAGCTACCTCTTAAATCCTGAGTTCAGTTATCCTAGCTGATGTGAAGAGACACTGTGTAGGGTTACAGGAATGTCTTCAGCTCCAGTTCAAGAACCACACTACCTGCTGGTACCTTTAGTGCCTCCCGGGGTTGGGGGGGCTTGTGAGAGTCGCGCTGATTGTTTTCCGCTCCTACATGACAGAATAGGATCTCCAGTGGTCAAGAAATCTCTTCCTAGCCATTATAGAGACTGTGCTCGGCCTATGAACTCGATCACTTCCTCCCTTCTTCAGTAAAGCAGGACACTACGACACCGCTACCCCGGCATCCTGCCAAGCCTTCCTATAACTATTACTCCagtgctgtgtattttgttttagttcagtGATATACGAGTCTATATACAATACTGCACTTGTCCTTTTTCTTGTCCTGGTTGTATCCACAGTTTTATGCAGTAATtctctattttttattttattttttgcatttgtttttatttaatacctGTAATGTAGTTTAGAGGGTTTGGTATTGGCCTACAATGTGCTGAATATAGAtatgtaaataaagaaatatgtcaatataaatc

Function

symbol description
tmem222 Predicted to be integral component of membrane.

NR:

description
PREDICTED: transmembrane protein 222 isoform X1

GO: NA

KEGG:

id description
K20726 TMEM222; transmembrane protein 222

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010857 True 5307 mRNA 0.47 7 2694405 2706621

Neighbor

gene id symbol gene type direction distance location
AMCG00010851 NA coding downstream 4995 2687066 ~ 2689410 (-)
AMCG00010848 NA coding downstream 32547 2649261 ~ 2661858 (-)
AMCG00010849 nudc,LOC107737783,LOC107580217,LOC104951062 coding downstream 56350 2630474 ~ 2638055 (-)
AMCG00010850 NA coding downstream 65888 2625003 ~ 2628517 (-)
AMCG00010852 gpn2 coding downstream 71077 2619961 ~ 2623328 (-)
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding upstream 5906 2712527 ~ 2723800 (-)
AMCG00010859 NA coding upstream 55905 2762526 ~ 2767269 (-)
AMCG00010867 NA coding upstream 237574 2944195 ~ 2945511 (-)
AMCG00010868 NA coding upstream 252654 2959275 ~ 2971015 (-)
AMCG00010873 LOC101163182,LOC101080136,LOC107569308,LOC107754925,LOC108229131,LOC107395731,LOC103130392 coding upstream 269835 2976456 ~ 2984072 (-)
G102725 NA non-coding downstream 19269 2674563 ~ 2675136 (-)
G102651 NA non-coding downstream 256707 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 331295 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 377141 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 441938 2252119 ~ 2252467 (-)
G102785 NA non-coding upstream 82849 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 248139 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 284026 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 438643 3145264 ~ 3145687 (-)
G102888 NA non-coding upstream 453216 3159837 ~ 3160036 (-)
AMCG00010843 NA other downstream 197959 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1659531 1033830 ~ 1034874 (-)
G102434 NA other downstream 1716278 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2544576 136369 ~ 149829 (-)
G102762 NA other upstream 33195 2739816 ~ 2778023 (-)
G102774 NA other upstream 51857 2758478 ~ 2761264 (-)
G102902 LOC104921322 other upstream 473349 3179970 ~ 3182619 (-)
G102990 NA other upstream 614192 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 614755 3321376 ~ 3327559 (-)

Expression


Co-expression Network