AMCG00010859


Basic Information

Item Value
gene id AMCG00010859
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2762526 ~ 2767269 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010859
ATGATAtggattgtattatatttttccacAGCGCCGGCTCCCTCCTCTGTAGGGCATGCTGAGGGGCGGGACTTCCAGGTGAACTTcgacctggtcctggagaatgTCCGGGACCTGAACGTCCTGGCCGGGGAGGGCGAGTCCCATGTGGAGCGCGTGGCGGGGGGGGCGCGCCTGGCCCGGTCCTCGGCCATCCCCCTCTCGCTCTTCAGGAACGGCATCGTCATGTTCGAGGGCCCCTTCCGCCCCTATGAGGAGCCCCACACACGGACGAGGTTCCCGGACGGAGTACCCTTCGAGGTTCGTACCCCTTCCCCCGCGCCTCCGGCCACGCGCACGCGAGAGAGACGGGGCGCTGAGGACCCCAAGGCGAGGTGGATGGGCGAGGGAGCCGCGGTGGTGCGGGACCGCCGGGACGAGGTGTACAGGCAGAGCCGGCGCTGGGAGGAGTTCCCAGGGGAGGGCCGGATGGTGGGGGGCGTGCCGGAGACCGGTCACGCGGCAGGTCCCAGGCTGTCTGTGGAGCAGTTCTTAAACAGGCTGCCCAAGGCCGTGATCAAGGAAGGCAAGGTGATCGACATCAGGGGCTCCATCAGGGACAACCTGCAGGGTCCCTCTCAGGCCCAGGGCAGCCGTGTGACCCTCATCGAGACGCCAGCTCTCCAGGCCCTGAAGCAGAGGCTAGAGCTGAGTGAGGACATtcgaccccccacccccgcaaACGTCTCCACGCTGAGGGTCAAATCCGAGGACGGGGAGCAGACCTACATTGTCAAGATGCTGTTCTCTGAGACAATCGGACAGCTGCGCCAGCACCTGGACACTCACAgggGGGACGATCGCCCGCACTATGACATCATCAGCTCCTTCCCCCCGCGGAGCTACAGCGATGGCTCCCAGACGCTGCTGCAGTGCGGCCTGACGCCCAACGCCACCCTGCTGCTCCGGGCCCGGCCCCGTGCCACTCCGGGCACCGGGCCCTGA

Function

GO: NA

KEGG:

id description
K24353 UBXN11; UBX domain-containing protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010859 True 984 mRNA 0.66 7 2762526 2767269

Neighbor

gene id symbol gene type direction distance location
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding downstream 38726 2712527 ~ 2723800 (-)
AMCG00010857 tmem222,LOC103368846,LOC106570241 coding downstream 55905 2694405 ~ 2706621 (-)
AMCG00010851 NA coding downstream 73116 2687066 ~ 2689410 (-)
AMCG00010848 NA coding downstream 100668 2649261 ~ 2661858 (-)
AMCG00010849 nudc,LOC107737783,LOC107580217,LOC104951062 coding downstream 124471 2630474 ~ 2638055 (-)
AMCG00010867 NA coding upstream 176926 2944195 ~ 2945511 (-)
AMCG00010868 NA coding upstream 192006 2959275 ~ 2971015 (-)
AMCG00010873 LOC101163182,LOC101080136,LOC107569308,LOC107754925,LOC108229131,LOC107395731,LOC103130392 coding upstream 209187 2976456 ~ 2984072 (-)
AMCG00010871 NA coding upstream 245324 3012593 ~ 3031562 (-)
AMCG00010872 si:ch211-195b13.1,LOC108273319,LOC108411161,LOC103036792,LOC107102671,LOC108251730,LOC103473069 coding upstream 267078 3034347 ~ 3044090 (-)
G102725 NA non-coding downstream 87390 2674563 ~ 2675136 (-)
G102651 NA non-coding downstream 324828 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 399416 2362880 ~ 2363110 (-)
G102629 NA non-coding downstream 445262 2316765 ~ 2317264 (-)
G102623 NA non-coding downstream 510059 2252119 ~ 2252467 (-)
G102785 NA non-coding upstream 22201 2789470 ~ 2833183 (-)
G102816 NA non-coding upstream 187491 2954760 ~ 2954975 (-)
G102834 NA non-coding upstream 223378 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 377995 3145264 ~ 3145687 (-)
G102888 NA non-coding upstream 392568 3159837 ~ 3160036 (-)
G102774 NA other downstream 1262 2758478 ~ 2761264 (-)
AMCG00010843 NA other downstream 266080 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1727652 1033830 ~ 1034874 (-)
G102434 NA other downstream 1784399 975553 ~ 978127 (-)
AMCG00010794 NA other downstream 2612697 136369 ~ 149829 (-)
G102902 LOC104921322 other upstream 412701 3179970 ~ 3182619 (-)
G102990 NA other upstream 553544 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 554107 3321376 ~ 3327559 (-)
AMCG00010901 NA other upstream 786717 3553986 ~ 3574815 (-)
G103112 NA other upstream 1402524 4169793 ~ 4185974 (-)

Expression


Co-expression Network