AMCG00010861


Basic Information

Item Value
gene id AMCG00010861
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2828796 ~ 2833103 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010861
GGACTTTCTCACTTCCCAAGCAAAACGTGAATCTTAAGACGAGAGACTGGAGTCCAGAGCAGCTCGACCTCCGGACACAGACGCCTCACCATGTTCGCGAAAGTCTCCGCCCGCtgctggctgctgctgctggccgGACACATGGTCCAAGCAGAGGACTGCTCCCAGTCCTGCAATTGCCCCAGCGACTCCCCTCCTTGCCCCATTGGCACTAGCCTGGTCCTGGACGGCTGCGGCTGCTGTAAGGTGTGTGCCAGGCAGGCGGGCGAGCCCTGCTCTCTCCTGCAGCCCTGCGATCACCACAAGGAGCTGTACTGCGACTACTCGGTGCTCAGTGACACGGAGGCTGGCATCTGCATGGCCCGAGAAGGCATGACCTGCGACCTGGGCGGTGTGATCTACCGCAGCGGGGAGACCTTCCAGCCCAGCTGTAAGCACCAGTGCCTGTGCATGAACGGCGAGATCGGCTGCGTGCCCATGTGCACCAACGACGTGCGGCTGCCCTCGCCCGACTGCCCCTACCCCCGCCGCATCCAGATCCCCGGCAAGTGCTGCGAGGACTGGGTGTGCGACCAGACGCCCCAGGACAACCTCTTCCAGGCAGCCATGGCCGTGTACCGCGAGGTGCCGGCGTACCGCCCCGAGCCCGAGAGCCCGCGGGACAACTGCATCGTCCAGACGACCGAGTGGAGCGAGTGCTCGACCACCTGCGGCATGGGCATCTCCAACCGCGTCACAAACGACAACGAGCGCTGCCAGCTGGAGAAGCAGAGCCGCATCTGCATGGTGCGCCCCTGCCACGTCTCCCAGGAGAGAGGCATCAAGAAGGGGAAGAAGTGCGTCCGCACGCCCAAGACCCAGAGGGCCATGCGCTTCGAGCTGTCCGGCTGCAGCAGCGCCCGGCTCTACAAGCCCAAGTTCTGCGGCGTGTGCACGGACGGCCGCTGCTGCAGCCCCCACGCCACCGCCACGGTGGAGGTGGAGTTCAAGTGCCCCGAGGGGGACAGCTTCCGCAAGAGGATGATGCTCATCAAGAGCTGCTCCTGCCACCACGACTGCCCGCGCGACAACGACATCTTCCTGTCCACGCACCACCGCAGGATGATCGGAGACTACGACATGTGAGGCGCCGGGACGAGTCGCCCCCCCCCGCCCAGTGCCTCCGccacccctccacacacacacacacacagccccccaccaccccactctctctctcgttttgtTAGAGGGTTGCACTGCACTGACATGTATTCACTGCCCCCCGCACACCGAGACAGACCCAGTACAGAACTGGAGCCGCAGATCATTCCCGCCCTGCTGTTGGCACCGGTGCTGAGGAGACTGGCCCGTGGAGGTCACCGTGTCGAGTGCTGTGTGGCAGACAGTGCCCGAGGGCAGGTGTCCGGACCCCCCGTGCCAGGGCTCTGCTCAGCACCGCGGTGGGCAGTCAGGGTCTCTGTCAGCAGCTGTACGTGAACCGGATCTGAACAGACAGACTGAACCGAGATAAACGTGTCCCAAACCCCTGCGATGGTTATAATCATGTCTGACCCAGAGTGAGACCTGGTGTCCCCGGATCCAGTCCTGCTCGGGCAGCGAAGACAGGCAGTGAAGCCAACTTAGTTTGATTTGCACAACTGCCCTCGTACCCCCCCATAGCACTTAACCTGAGGCACTGTGACGTAGAACCCCGCCGTTGTGAAATGCTGTATTTCTCAATAGACCGATGCCCTGAGAGCATCGCCCTGAGTCTCTTCTGCATCCTGTGATGTGGCAATGTGTCCCATGTGGCCTTCGAGAATGCCTGAGAggaaagtatatatatacatatatatatatattatccatCTTCAAGAAACGAAACAACGCATTGAAAATGTGGCTTTTTAGAGAATTACTGTTGATGACATTgcttactgtatatttaaagaaacGATGGAATCTGACTCTTGACAAATGTGCCttgtgtaaataatgtaaataggtcatgtacagttttgtactataatttatgttattgttttactcCAGACTTAGTCGTATTGTACTGTATCCTTACTGTTTCACTGCAATTGCTTGTGTTCCGCTGAGATGCAAGCGAGTAaacatttattgcactttagTTGGTttccaataaaatgttttctattttttatataca

Function

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010861 True 2164 mRNA 0.58 5 2828796 2833103

Neighbor

gene id symbol gene type direction distance location
AMCG00010860 stx12 coding upstream 33290 2788247 ~ 2795506 (+)
AMCG00010862 NA coding upstream 41898 2781574 ~ 2786898 (+)
AMCG00010855 NA coding upstream 74803 2745754 ~ 2753993 (+)
AMCG00010853 NA coding upstream 96702 2731030 ~ 2732094 (+)
AMCG00010846 NA coding upstream 184470 2642373 ~ 2644326 (+)
AMCG00010864 NA coding downstream 34105 2867208 ~ 2877101 (+)
AMCG00010866 NA coding downstream 59915 2893018 ~ 2895324 (+)
AMCG00010865 epb41,LOC106589039 coding downstream 69700 2902803 ~ 2912051 (+)
AMCG00010863 cf191,LOC106605955,LOC105018927,LOC106592819,LOC102308631 coding downstream 151872 2984975 ~ 2989681 (+)
AMCG00010869 NA coding downstream 157528 2990631 ~ 2999103 (+)
G102693 NA non-coding upstream 167938 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 378915 2449200 ~ 2449881 (+)
G102628 NA non-coding upstream 511226 2316937 ~ 2317570 (+)
G102622 NA non-coding upstream 576326 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 653732 2174796 ~ 2175064 (+)
G102843 NA non-coding downstream 193965 3027068 ~ 3027397 (+)
G102859 NA non-coding downstream 260831 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 266818 3099921 ~ 3103642 (+)
G102944 NA non-coding downstream 599712 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 601816 3434919 ~ 3457657 (+)
AMCG00010856 NA other upstream 50763 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 66570 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 755554 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 764452 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 864831 1945055 ~ 1963965 (+)
AMCG00010884 NA other downstream 468853 3301956 ~ 3310953 (+)
G102921 NA other downstream 498481 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 498616 3331719 ~ 3338416 (+)
AMCG00010888 NA other downstream 587979 3421082 ~ 3428429 (+)
G102947 NA other downstream 603515 3436618 ~ 3443534 (+)

Expression


Co-expression Network