AMCG00010863 (cf191,LOC106605955,LOC105018927,LOC106592819,LOC102308631)


Basic Information

Item Value
gene id AMCG00010863
gene name cf191,LOC106605955,LOC105018927,LOC106592819,LOC102308631
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2984975 ~ 2989681 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010863
TCTGTAACCGGCGCGCAGTTCCCGGCCGCGCCGCTAGAGGGAGGCGTGCTGCGGGCCGAGCAGCGCTGTGGTCCGGGCAGCAGGCAGAGCCGCACACGGCGGCCGGCAAAACACGCGTCCATGGCATTCAGAGGCAAAGTGGCCGACACGCAGACAGTCCTCCTGCATTTGCTGCTGTGTTTGGTCATTTTCTACACTGTCTACTACATGGTCGGCAGCGTCTGCTTTGGCGCATTCAAACTGGACCATTTCGATGGACTTATTCCCTTTGATTTCAAGACCGAACCCTCCGAGTCCAGCTCCCGATATCTCGTGAACTTGCTGTCCATGGAGCTCACCTACTTCAGCAGTGGGCTGCTCTTTGCCGCGGTGGTGCGGAGATGGGTGTGGGACTATGCCTTGACGGTCACGCTCATCCACGTCGCATTGACCTCAATAGTCATGTTGGAGTTTCCCCTAGTATGGCAATGGTGGCTGGCCTTAGGTAGTGGTTTGTTCCTCATGATCTGCAACGGTCAGCTGATTGCTTACTTCGCCTGTCAGAGTGACCACCGCTATCCCACGTTCCACAGCTACTGAGCACAAGAACCGGCCATCGGGCGACGAGTGGGGGACCGACCACGGGACACTGTGCTTGAGGTGTGGAGCGCTGAGGACACAACAAATCATTCGGTGTCCCTTGGGGGGTGGACAGGGCGTGCGCACAGTGCTGACGGTCACTCAGGAAGGAGATAAGCTGAGAGTCACCTGATGTCAGTAATTTCAGTGCTGCCCACTGGACAGAGTTAGGTGGGGGTGCAGgggatttattttcctatattttttaaactgagtGAACTCAGTCCAGTCGGCCATAGTGGTGGACAGTAACATGTCCATTAACACTAAATACTTTCTAAGCTTCGGTTTGGCCCAGTAAATGCCCGGGCAAGTCTGATGTGCCAAGGCTGACaggtttgaaaatgaaattttTATCAGCCAACCATGAATTGCCCCTGATGGACAgaggaatatgtgtgtgttgtatttatgATGGCCGTAGGTTTGCGCTATGAGCTAGTGGCGATTCTAAAATTTGGCGGAGGGGatctgaaaatacaataattgggAAGatgaattaagaaaacaaaaacctctttaaaacacattaaacatgaCAGATTATTTAAACTTCTAATCGGGACAGAGGCTGTGAAGCCAAACAACACTTTGAGGCCGCTTTGAACCAGCCTTGCTCCCCTACAGACGTCTAGATTTTGTGATTAATTCAAACAACAATCTGCTGCCTGTGACCAGCCGGAGCTTGAACAGTGACACACGACTGGGTATTTAGAGTTTGCACTTTGAAAACTCGGGCTGAATACCCGAATGGGCTTCCGGCTGGTCATAACTCCTCATTTTAAACTGCTGCTATTACAAGCCTGTAGAAGTCATGTGATAAGGAACTCACATATGATTGGCTGCGCTCTGCATGCTGACATTAACGACATTATGGcctattcatgtatgtatttgtttacggAAATGAAAAgtagtgaaataaaaacaacattgaca

Function

NR:

description
CF191 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010863 True 1557 mRNA 0.50 6 2984975 2989681

Neighbor

gene id symbol gene type direction distance location
AMCG00010865 epb41,LOC106589039 coding upstream 72924 2902803 ~ 2912051 (+)
AMCG00010866 NA coding upstream 89651 2893018 ~ 2895324 (+)
AMCG00010864 NA coding upstream 107874 2867208 ~ 2877101 (+)
AMCG00010861 NA coding upstream 151872 2828796 ~ 2833103 (+)
AMCG00010860 stx12 coding upstream 189469 2788247 ~ 2795506 (+)
AMCG00010869 NA coding downstream 950 2990631 ~ 2999103 (+)
AMCG00010870 NA coding downstream 15080 3004761 ~ 3008291 (+)
AMCG00010876 NA coding downstream 122753 3112434 ~ 3128249 (+)
AMCG00010875 NA coding downstream 155433 3145114 ~ 3167623 (+)
AMCG00010874 zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 coding downstream 183141 3172822 ~ 3179031 (+)
G102693 NA non-coding upstream 324117 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 535094 2449200 ~ 2449881 (+)
G102628 NA non-coding upstream 667405 2316937 ~ 2317570 (+)
G102622 NA non-coding upstream 732505 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 809911 2174796 ~ 2175064 (+)
G102843 NA non-coding downstream 37387 3027068 ~ 3027397 (+)
G102859 NA non-coding downstream 104253 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 110240 3099921 ~ 3103642 (+)
G102944 NA non-coding downstream 443134 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 445238 3434919 ~ 3457657 (+)
AMCG00010856 NA other upstream 206942 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 222749 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 911733 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 920631 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 1021010 1945055 ~ 1963965 (+)
AMCG00010884 NA other downstream 312275 3301956 ~ 3310953 (+)
G102921 NA other downstream 341903 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 342038 3331719 ~ 3338416 (+)
AMCG00010888 NA other downstream 431401 3421082 ~ 3428429 (+)
G102947 NA other downstream 446937 3436618 ~ 3443534 (+)

Expression


Co-expression Network