AMCG00010868


Basic Information

Item Value
gene id AMCG00010868
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 2959275 ~ 2971015 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010868
ATGGCCCTAGTGTTCGCCTCAGTTATGCGGTCAGGAGAAGCCAAGAAGATGACCGACACCCCTCCCACTGAGACTTCCACCACCGGGGGTGACTTTGACATGATGAGTGCCCTAGACTGGAAGGACGGCATCGCCACCCTGCCGGGGAGCGACATACGGTTCCGTATGAACGAGTTCGGGGCGCTGGAGATCATCACCGACCTGGAGATGGATTCCACCCAAGGCACTGCCAAGGCAATGCAGCCACAGGACCCCTCCCCCGCCGACAGCCCCACCCCGCCGCCAGAGGTCCCCGAGACCACCCCCCAAGCCCAACCCGCAGGGCCTGTGCTGCTCTCCCAGAGCCCGGTTCCCCTGGAAGAGGCCCCCAGCGTGGAGGTGGTCAGCTGTGTCTCCTGTGGAGTCTCTGGGAACCTGGACTGCTTCCTTCAGGGCAAGTTCTGCAGCCCTGCCTGCGCCCAGCCCTCCAGCAGCagGGCCAGTCCGGTGGAGCCGCGAGACAAGGGGGTGGCCGGCGCTAACCCTGGCAGCGAGAGCGACAGGCTGGGGAAACGCGTGCGGAAGAAGAGAAAGCTGTACATGGACTCTGGCGACGAAGAGGAGGACAACCCTGACGACGAAGAGGAGAAGTCCAGGGCTGGAAAAGGGAGGAGGGCTGCTAAACAGGCGAGGCAAGTGATCGCCCCACCGGCCAAGAAGAAGCTGTGGAGCTGGCCTGCCTACCTGGAGGAAGAGAGAGCCACCGCAGCCCCCGTGAAGCTCTTCAAAGAGCACCAGACCTTCCCTCAGAGCCGCAACGTGTTTAAAGTGGGGATGAAGCTGGAGGGCCTGGACCCATGGCACCCCTCCCTGTTCTGTGTGCTGTCTGTGGCTGAGGTGCAGGGTTACAGGATCCGGCTACACTTCGACGGCTACCCGGAGTGCTATGACTTCTGGGTGAACGCCGACTCCTGGGACGTGAAGCCGGCCGGCTGGTGTGAGAAGACGGGACACAAGCTGCTACTTCCCAAGGGGTGCAAGGACGGCGAGTTCAACTGGAGCACCTACGTGAAAAACTGCCGCGGTCAGATCGCTCCCAAACACCTTTTCAAGAGTCTCAACACCTCCGTGACGCCCTCTGGGTTCCGGCCCGGGATGAAGCTCGAGGCAGTGGACCGGAAGAACCCCTCTCTGATCTGCGTGGCCTCCATCGCCGGCGTGGAAGCGGGGTTAACCCTCACAGCGCCGGCCGAGTACAAGCACCCGAAGAGCTTCTCCTGGGAGAAGTACCTAGAGGAGACGGGATCGCAGGCCGCACCGGCCCGAGCCTTCAAACAGagaCCACCCCATGGTTTCCAGGTGAACATGAAGCTGGAGGCGGTGGACAAGAGGAACCCCATGCTCATCAGGGTGGCCACCATCTCTGACACCGAAGAGCACCGCGTCAAGATCCACTTTGACGGCTGGAGTAAGGACTACGACTACTGGGTAGATGCTGACAGCCCAGACCTGCATCCGGTGGGCTGGTGTCACAAGACCGGCCACCCCCTACAGAACCCGCAGGGACTCTCCGATTCCTCCGTGCTCCCGGGACAGGGCTGCCCCACACCGGGGTGTAACGGCGTGGGTCACATCCGAGGGCCGCGATACGGCACACACTACACGGCCGTCAGCTGTCCGTACTCCGAGGTCAACCTGAACAAAGAGGGACTGGTGCCCGACCGGCTGAGCGGGGAGAGACCGGCGGCCGCGGCGGGGCCACACCGGGGCAAGAGGCCAGAGCCGTCCACGCCCACCTCCACCACCCCCGACCTGCCCGAGCTGCAGGACGACTCGCCCCACTCCAGCGCTGGCAGGAAGTCCTGGAGCGGAGAGAGCGAGCGCTCGGGGCGCAGCAGCTCTCAGAGCCTGTCAGAGCCGACGCACTGTGCCGAGGAGAGGACAGGGGGCGCCGCTGAGCCCTGCCCCAATGGAACCAAGGCCAAAAAGTCTGCGCCGATTCCAAAGTGTCTGAAGCTGCACTTagtgaaacaggaagtgggagaTGGAAAAGaagGCCAGGTTAGTCTCCAGCAGGCCCTGCACGAGTCGGTGTTCACGCCCTCCTGCTCCAGCAGCCCCACCCAGAGGATCCAGATGTGCTGGGAGAAGCACTGTAAGCTGCTTCCAGAGGTGCTGGGGCTGACGGCCAAGAGGGTGGCCAAGTGGAGCACGGAGGAGGTCGCCAACTTCGTCAAAGGTCTGCCTGGCTGCAAAGAGCACGCTGCCATCTTCAGGAACGAGGCGGACATCGTCAAGATCCTCAGCATCAAGCTGGGTCCGGCCCTGAAGATCTACAACTCCATCCTGATGTTCAAGAGCAGTGACGAGGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010868 True 2355 mRNA 0.63 22 2959275 2971015

Neighbor

gene id symbol gene type direction distance location
AMCG00010867 NA coding downstream 13764 2944195 ~ 2945511 (-)
AMCG00010859 NA coding downstream 192006 2762526 ~ 2767269 (-)
AMCG00010858 wdtc1,LOC106605082,LOC106583467 coding downstream 235475 2712527 ~ 2723800 (-)
AMCG00010857 tmem222,LOC103368846,LOC106570241 coding downstream 252654 2694405 ~ 2706621 (-)
AMCG00010851 NA coding downstream 269865 2687066 ~ 2689410 (-)
AMCG00010873 LOC101163182,LOC101080136,LOC107569308,LOC107754925,LOC108229131,LOC107395731,LOC103130392 coding upstream 5441 2976456 ~ 2984072 (-)
AMCG00010871 NA coding upstream 41578 3012593 ~ 3031562 (-)
AMCG00010872 si:ch211-195b13.1,LOC108273319,LOC108411161,LOC103036792,LOC107102671,LOC108251730,LOC103473069 coding upstream 63332 3034347 ~ 3044090 (-)
AMCG00010877 mtfr1l coding upstream 132959 3103974 ~ 3107204 (-)
AMCG00010878 NA coding upstream 157237 3128252 ~ 3141209 (-)
G102816 NA non-coding downstream 4300 2954760 ~ 2954975 (-)
G102785 NA non-coding downstream 126092 2789470 ~ 2833183 (-)
G102725 NA non-coding downstream 284139 2674563 ~ 2675136 (-)
G102651 NA non-coding downstream 521577 2386723 ~ 2437698 (-)
G102639 NA non-coding downstream 596165 2362880 ~ 2363110 (-)
G102834 NA non-coding upstream 19632 2990647 ~ 2991248 (-)
G102887 NA non-coding upstream 174249 3145264 ~ 3145687 (-)
G102888 NA non-coding upstream 188822 3159837 ~ 3160036 (-)
G102889 NA non-coding upstream 189568 3160583 ~ 3160897 (-)
G102890 NA non-coding upstream 190082 3161097 ~ 3161512 (-)
G102762 NA other downstream 181252 2739816 ~ 2778023 (-)
G102774 NA other downstream 198011 2758478 ~ 2761264 (-)
AMCG00010843 NA other downstream 462829 2481874 ~ 2496446 (-)
AMCG00010806 NA other downstream 1924401 1033830 ~ 1034874 (-)
G102434 NA other downstream 1981148 975553 ~ 978127 (-)
G102902 LOC104921322 other upstream 208955 3179970 ~ 3182619 (-)
G102990 NA other upstream 349798 3320813 ~ 3419176 (-)
AMCG00010895 NA other upstream 350361 3321376 ~ 3327559 (-)
AMCG00010901 NA other upstream 582971 3553986 ~ 3574815 (-)
G103112 NA other upstream 1198778 4169793 ~ 4185974 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038343 NA non-coding NW_003336152.2 KN149727.1 14319 ~ 16355 (+)
grasscarp (Ctenopharyngodon idella) CI01000135_00935305_00937803 L3MBTL3 coding CI01000135 null 934474 ~ 939483 (-)