AMCG00010870


Basic Information

Item Value
gene id AMCG00010870
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3004761 ~ 3008291 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010870
ATGGAAGAAGGAAacccttttgtatttttaaggagGGATTTTTTCATGACACTTGTTGGAGTGATTTTCTTCACGATTGACTTGGTTCTGGATGTGTGGGCGGTGGTGAATTTGTATCATGACGGAGACTACATCTGCATGTGGGTGCTGATCTTCCTGTTGGTGGGATCATCTGTCTTAGTTCAGATATTCAGCTGGCTGTGGTACAGCTATGACCCCCAGCCAACAAACACCAAAGTGGAAACCTTCATTCAACACAAAGGGTTGCTCACAGGGGTGCATGTGTTACAGCTGGGTGTGTTCTTAAGGTATGCGGGGGTCCTAGAAACAGCTGTGCGGCAGTTTCGGAAGAAAGAGAGCCAACTGGAGGGATTGGCTGTGTATCTGACTCATGACCTCAACATGCTGCGGCTGTTTGAGACTTTCTCTGAGAGCACCCCCCAGCTGATCCTCATGTTCTACATCTTCATGCAGGAAAGCGAACTGGAACTCATTACAGGCGAGTACAGCTTCAGCTCTATGCTTGCCAAGATAGCAGGCTCTTGCTTTGCCATCAGCTGCAGTGTTGTGGCATACCACCATGCCATGCGCTCCTTTCTGCCCAAAAAGGCCAAACTGGACTGGCTCTCCTCGGCCATCTACTTCCTGTGGAACCTGCTGCTGATTACCCCACGCTTGACCGCTCTGGCCCTCTTCGCCTCCGTCCAGCCCTTGTTCATCGCTCCACACTTCCTGGTGCTGTGGGTGGCCCTGTTCATCTGCATCTTGCTCCAGAAGACAGATTTCATGGACAATGCCCTGGGAGAATGGCTCTACCGTGGCACAGTGGCAATCATCTGGTACTTCAGCTGGTTCAATGTGGCCGAGGGTCGGACACGGGTCAAGAGCTTCCTCTACCATTTCTTTATACTGCTGGATAGTGCCATCCTGATGAGCGTGTGGTTGAGATGCAGGGACCCAATGCTGACACAATCCTATTCCTTGCCCCTGGTGATAGTGATGCCCATATTATACGTAGCAGGCCTCCTGATGAAAGTCCTCTACTACAGGCATTTCCACCCCAAACATCCTCAGCTATTGTCACCTGCTCCTCAGGATAAAAGCCATCCCATGCAGGAGGACTCCAGCCCAATACAATCCCGCAGCCTCCACTCAGGCAAGATTACACAAACCACAGGAGCTGCAGAAGTCAGGGTCAACAAGAGGATGAGGAAGCTGGCTGCCAACTTCTACTCCTCTCCCATCCAAGCAGGAACAACGAGGGCTGGTCCTCCCTCTGACGAGTCCCAACTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010870 True 1296 mRNA 0.51 3 3004761 3008291

Neighbor

gene id symbol gene type direction distance location
AMCG00010869 NA coding upstream 5658 2990631 ~ 2999103 (+)
AMCG00010863 cf191,LOC106605955,LOC105018927,LOC106592819,LOC102308631 coding upstream 15080 2984975 ~ 2989681 (+)
AMCG00010865 epb41,LOC106589039 coding upstream 92710 2902803 ~ 2912051 (+)
AMCG00010866 NA coding upstream 109437 2893018 ~ 2895324 (+)
AMCG00010864 NA coding upstream 127660 2867208 ~ 2877101 (+)
AMCG00010876 NA coding downstream 104143 3112434 ~ 3128249 (+)
AMCG00010875 NA coding downstream 136823 3145114 ~ 3167623 (+)
AMCG00010874 zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 coding downstream 164531 3172822 ~ 3179031 (+)
AMCG00010882 LOC104921322 coding downstream 171669 3179960 ~ 3182656 (+)
AMCG00010881 LOC106588497,LOC102218321,LOC107094257,LOC103154989 coding downstream 174828 3183119 ~ 3188870 (+)
G102693 NA non-coding upstream 343903 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 554880 2449200 ~ 2449881 (+)
G102628 NA non-coding upstream 687191 2316937 ~ 2317570 (+)
G102622 NA non-coding upstream 752291 2252103 ~ 2252470 (+)
G102611 NA non-coding upstream 829697 2174796 ~ 2175064 (+)
G102843 NA non-coding downstream 18777 3027068 ~ 3027397 (+)
G102859 NA non-coding downstream 85643 3093934 ~ 3130264 (+)
G102860 NA non-coding downstream 91630 3099921 ~ 3103642 (+)
G102944 NA non-coding downstream 424524 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 426628 3434919 ~ 3457657 (+)
AMCG00010856 NA other upstream 226728 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 242535 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 931519 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 940417 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 1040796 1945055 ~ 1963965 (+)
AMCG00010884 NA other downstream 293665 3301956 ~ 3310953 (+)
G102921 NA other downstream 323293 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 323428 3331719 ~ 3338416 (+)
AMCG00010888 NA other downstream 412791 3421082 ~ 3428429 (+)
G102947 NA other downstream 428327 3436618 ~ 3443534 (+)

Expression


Co-expression Network