Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010884 |
| gene name | NA |
| gene type | misc |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 3301956 ~ 3310953 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | molecular_function |
| GO:0005506 | iron ion binding | molecular_function |
| GO:0020037 | heme binding | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010884 | True | 597 | mRNA | 0.50 | 4 | 3301956 | 3310951 |
| TU128591 | False | 382 | TUCP | 0.49 | 2 | 3309738 | 3310953 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010885 | NA | coding | upstream | 18626 | 3277827 ~ 3283330 (+) |
| AMCG00010881 | LOC106588497,LOC102218321,LOC107094257,LOC103154989 | coding | upstream | 113086 | 3183119 ~ 3188870 (+) |
| AMCG00010882 | LOC104921322 | coding | upstream | 119300 | 3179960 ~ 3182656 (+) |
| AMCG00010874 | zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 | coding | upstream | 122925 | 3172822 ~ 3179031 (+) |
| AMCG00010875 | NA | coding | upstream | 134333 | 3145114 ~ 3167623 (+) |
| AMCG00010889 | NA | coding | downstream | 38803 | 3349756 ~ 3386357 (+) |
| AMCG00010890 | NA | coding | downstream | 77302 | 3388255 ~ 3397892 (+) |
| AMCG00010887 | NA | coding | downstream | 126368 | 3437321 ~ 3439509 (+) |
| AMCG00010897 | NA | coding | downstream | 238512 | 3549465 ~ 3550451 (+) |
| AMCG00010903 | NA | coding | downstream | 359502 | 3670455 ~ 3677090 (+) |
| G102859 | NA | non-coding | upstream | 171692 | 3093934 ~ 3130264 (+) |
| G102860 | NA | non-coding | upstream | 198314 | 3099921 ~ 3103642 (+) |
| G102843 | NA | non-coding | upstream | 274559 | 3027068 ~ 3027397 (+) |
| G102693 | NA | non-coding | upstream | 641098 | 2623606 ~ 2660858 (+) |
| G102655 | NA | non-coding | upstream | 852075 | 2449200 ~ 2449881 (+) |
| G102944 | NA | non-coding | downstream | 121862 | 3432815 ~ 3433147 (+) |
| G102945 | NA | non-coding | downstream | 123966 | 3434919 ~ 3457657 (+) |
| G102959 | NA | non-coding | downstream | 148909 | 3459862 ~ 3462503 (+) |
| G103035 | NA | non-coding | downstream | 281715 | 3592668 ~ 3593407 (+) |
| G103137 | pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 | non-coding | downstream | 977070 | 4288023 ~ 4290680 (+) |
| AMCG00010856 | NA | other | upstream | 523923 | 2769140 ~ 2778033 (+) |
| AMCG00010854 | sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 | other | upstream | 539730 | 2756296 ~ 2762226 (+) |
| AMCG00010834 | NA | other | upstream | 1228714 | 2070677 ~ 2073242 (+) |
| AMCG00010832 | NA | other | upstream | 1237612 | 2039514 ~ 2064344 (+) |
| AMCG00010830 | NA | other | upstream | 1337991 | 1945055 ~ 1963965 (+) |
| G102921 | NA | other | downstream | 20631 | 3331584 ~ 3398506 (+) |
| AMCG00010886 | NA | other | downstream | 20766 | 3331719 ~ 3338416 (+) |
| AMCG00010888 | NA | other | downstream | 110129 | 3421082 ~ 3428429 (+) |
| G102947 | NA | other | downstream | 125665 | 3436618 ~ 3443534 (+) |
| G103030 | NA | other | downstream | 266282 | 3577235 ~ 3580277 (+) |
