AMCG00010885


Basic Information

Item Value
gene id AMCG00010885
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3277827 ~ 3283330 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010885
ATGTCTGTGATCGCAGTTCTGCTGGCGAACACTGTCACAGTGTCTCTGGTCTTCATTTTAACGATAGCCTCCTTCTTCTACCTTCTCTTCAAACCATCCAAGTCTGCTTACAGGTTCCCCCCCGGCCCGGCTGCCTGGCCTGTGATCGGGAATCTCAATATTCTGGACTTGAAGAAACCTCATGAAACTTTATGTCAGCTTTCAGAGAAGTATGGCAATGTGTTCACCTTTCACATGGGAAGGGATAAGTACTTGGTCCTGACTGGATATGAAACAGTGAAGGAGGCCTTGGTGAATCGGGCAGATGATTTCGGCGAGAGAGGCCTGACGCGTGTGTCCACAATGTTTGGAAAGGGCACCGGCGTCGTATTTGGATCTGGGGAGTCATGGAAGACCATGCGGAGATTTACTCTCTCCACCTTGCGGGATTTCGGCATGGGAAAGAGAACCATCGAGGACAGGATAGTGGAGGAGGCCCAGTGTCTGTTGGATGTCTTTGAGTCACATAAAGGTGACCCGTTTGACCCCATCATTAACATCAACTCAGCGGTGTCTAATGTGATCTGCACCATTGTGTTTGGAGACCGGTTTGACTACAGCGACCCCCAGTTCCTACGACTCCAGCAACTTGTCAATCAGAATGTTAAGCTCGTCACCTCCCCTGCGATGCGGCTGTACGACATCTCCCCTTTCCTGGGGTCCTTTCTTGCCAATTTCAAAAAACTATCCAGTAATGTTTTAGAGAATCGTACATTCTTCTCCAACTACTACCATGAGCGCAAGGACATTGTGGATAGAAACGACCTGAGGAGCTTCATTGACACTTTCATTGTCAAACAGCAGGAGGAGaaaGCTAAAAAcccaaatacttatttccatgAGATGAACATGGTGTCCACTGCAATGAACCTCTTTGCTGCAGGAACAGAAACAACGTCCACCACTCTGCGCTGGGGACTTCTAATGATGATGAAGTACCCTCATATACAG

Function

GO: NA

KEGG:

id description
ko02010 ABC transporters
ko04976 Bile secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010885 True 990 mRNA 0.48 6 3277827 3283330

Neighbor

gene id symbol gene type direction distance location
AMCG00010881 LOC106588497,LOC102218321,LOC107094257,LOC103154989 coding upstream 88957 3183119 ~ 3188870 (+)
AMCG00010882 LOC104921322 coding upstream 95171 3179960 ~ 3182656 (+)
AMCG00010874 zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 coding upstream 98796 3172822 ~ 3179031 (+)
AMCG00010875 NA coding upstream 110204 3145114 ~ 3167623 (+)
AMCG00010876 NA coding upstream 149578 3112434 ~ 3128249 (+)
AMCG00010889 NA coding downstream 66426 3349756 ~ 3386357 (+)
AMCG00010890 NA coding downstream 104925 3388255 ~ 3397892 (+)
AMCG00010887 NA coding downstream 153991 3437321 ~ 3439509 (+)
AMCG00010897 NA coding downstream 266135 3549465 ~ 3550451 (+)
AMCG00010903 NA coding downstream 387125 3670455 ~ 3677090 (+)
G102859 NA non-coding upstream 147563 3093934 ~ 3130264 (+)
G102860 NA non-coding upstream 174185 3099921 ~ 3103642 (+)
G102843 NA non-coding upstream 250430 3027068 ~ 3027397 (+)
G102693 NA non-coding upstream 616969 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 827946 2449200 ~ 2449881 (+)
G102944 NA non-coding downstream 149485 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 151589 3434919 ~ 3457657 (+)
G102959 NA non-coding downstream 176532 3459862 ~ 3462503 (+)
G103035 NA non-coding downstream 309338 3592668 ~ 3593407 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding downstream 1004693 4288023 ~ 4290680 (+)
AMCG00010856 NA other upstream 499794 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 515601 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 1204585 2070677 ~ 2073242 (+)
AMCG00010832 NA other upstream 1213483 2039514 ~ 2064344 (+)
AMCG00010830 NA other upstream 1313862 1945055 ~ 1963965 (+)
AMCG00010884 NA other downstream 18626 3301956 ~ 3310953 (+)
G102921 NA other downstream 48254 3331584 ~ 3398506 (+)
AMCG00010886 NA other downstream 48389 3331719 ~ 3338416 (+)
AMCG00010888 NA other downstream 137752 3421082 ~ 3428429 (+)
G102947 NA other downstream 153288 3436618 ~ 3443534 (+)

Expression


Co-expression Network