AMCG00010890


Basic Information

Item Value
gene id AMCG00010890
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3388255 ~ 3397892 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010890
ATGCATAAGGAGAAACCGGAAACCGGGACTcttTCAGAGAAGTATGGCAATGTGTTCACTTTTTACATGGGTAGGCATAAGTTCTTGGTCCTGACTGGATATGAAGTGAAGGAGGCCTTGCTGTACGAAATCTTTCCTTTCCTGGGGTCTTTTCTTGCCAATTTCAAGAAAATGTCCAGTAATAATTTAGAGACTCAGATGTACTTCTCCAACTACTACCATGAGCGCAAGGACATTGTGGATAGAAACGACCTGAGGAGCTTCATTGATGCTTTCATTGCCAAACAGCAGGAGGAGgaaataaaaaacccaaatacttatttcaatGAGGTGAACATGGTGTCCACTGCAGGGAACCTTTTTGGTGCGGGAACAGAAACTACATCAACCACTCTGCGCTGGGGGCTTCTGCTGCTGATGAAGTACCCTCATATACAG

Function

GO:

id name namespace
GO:0005488 binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010890 True 438 mRNA 0.44 4 3388255 3397892

Neighbor

gene id symbol gene type direction distance location
AMCG00010889 NA coding upstream 1898 3349756 ~ 3386357 (+)
AMCG00010885 NA coding upstream 104925 3277827 ~ 3283330 (+)
AMCG00010881 LOC106588497,LOC102218321,LOC107094257,LOC103154989 coding upstream 199385 3183119 ~ 3188870 (+)
AMCG00010882 LOC104921322 coding upstream 205599 3179960 ~ 3182656 (+)
AMCG00010874 zmpste24,face1,LOC107670834,LOC107654896,LOC102792402 coding upstream 209224 3172822 ~ 3179031 (+)
AMCG00010887 NA coding downstream 39429 3437321 ~ 3439509 (+)
AMCG00010897 NA coding downstream 151573 3549465 ~ 3550451 (+)
AMCG00010903 NA coding downstream 272563 3670455 ~ 3677090 (+)
AMCG00010905 LOC107688368,LOC107602377,LOC107654743 coding downstream 433422 3831314 ~ 3835049 (+)
AMCG00010907 NA coding downstream 492071 3889963 ~ 3893566 (+)
G102859 NA non-coding upstream 257991 3093934 ~ 3130264 (+)
G102860 NA non-coding upstream 284613 3099921 ~ 3103642 (+)
G102843 NA non-coding upstream 360858 3027068 ~ 3027397 (+)
G102693 NA non-coding upstream 727397 2623606 ~ 2660858 (+)
G102655 NA non-coding upstream 938374 2449200 ~ 2449881 (+)
G102944 NA non-coding downstream 34923 3432815 ~ 3433147 (+)
G102945 NA non-coding downstream 37027 3434919 ~ 3457657 (+)
G102959 NA non-coding downstream 61970 3459862 ~ 3462503 (+)
G103035 NA non-coding downstream 194776 3592668 ~ 3593407 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding downstream 890131 4288023 ~ 4290680 (+)
AMCG00010886 NA other upstream 49839 3331719 ~ 3338416 (+)
AMCG00010884 NA other upstream 77302 3301956 ~ 3310953 (+)
AMCG00010856 NA other upstream 610222 2769140 ~ 2778033 (+)
AMCG00010854 sh3bgrl3,LOC108273253,LOC106570239,LOC106588618,LOC105933927,LOC107580135 other upstream 626029 2756296 ~ 2762226 (+)
AMCG00010834 NA other upstream 1315013 2070677 ~ 2073242 (+)
AMCG00010888 NA other downstream 23190 3421082 ~ 3428429 (+)
G102947 NA other downstream 38726 3436618 ~ 3443534 (+)
G103030 NA other downstream 179343 3577235 ~ 3580277 (+)
G103078 NA other downstream 652046 4049938 ~ 4083586 (+)
AMCG00010922 NA other downstream 1236580 4634472 ~ 4642403 (+)

Expression


Co-expression Network