AMCG00010897


Basic Information

Item Value
gene id AMCG00010897
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3549465 ~ 3550451 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010897
ATGAATGAAAACTTCTCCAAGAGCTCTGGGGAGAGTGAGCAGGGCAGCTGGCTGGAACCCAGAGAGGACCGAGGCTCCTTAGATCTGGCATCGGTGCCTCAGGAACCTGTGCTCAACCCCTGGGATGTAGTGCTGTGCATCTCCGGCACCATCATCTCCTGTGAGAATGCCATCGTAGTGGCTGTGATCTTCTACACACCCTCTCTTCGCACACCCATGTTCCTGCTGATCGGGAGTCTGGCCACGGCTGACCTGTTGGCTGGACTGGGGCTCATCCTGCATTTTGTGTTCCTGTACTGTGTCCAGTCGGAGGTTGTGAACCTCATCACCGTAGGACTGCTGGTGGCCTCCTTCACGGCCAGCGTCAGCAGCCTCCTGGCCATCACCATTGACCGGTACCTCTCGCTCTACAACGCACTGACCTACTACTCAGACCGCACTGTGACACGGACTTACATCATGCTCATCCTCACCTGGGGAGTGTCCATCTGCCTGGGGATGCTTCCCATTATGGGCTGGAACTGCCTGAAGGACACGGCCTCCTGCAGCATTGTCCGGCCGCTGACCAAGAACAACCTGGTCATCCTGTCCGTGTCCTTCTTCATGGTGTTTGCCCTCATGCTGCAGCTCTACACCCAGATTTGCAAGATCGTGTGCCGCCACGCCCACCAGATAGCCCTGCAGCGCCACTTCCTGTCCACCTCCCACTACGTCACCACCCGAAAGGGCATCTCCACCCTGGCTGTCATCCTGGGCACATTTGCCAGCTGCTGGTTGCCCTTCACCATCTACTGCCTGTTGGGGGACTACACCTACCCACCCCTCTACACCTACATCACCCTACTACCCGCCACCTACAACTCCATGATCAACCCCATCATCTACGCCTTCCGAAACCAGGAGATCCAGAAGGTTCTGTGGGCGGCTTGCTGCGGCTGCATGTCCTCCAAAATGTCCTGTCGATCCCGGTCGCCCAGCGATGTGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010897 True 987 mRNA 0.58 1 3549465 3550451

Neighbor

gene id symbol gene type direction distance location
AMCG00010887 NA coding upstream 109956 3437321 ~ 3439509 (+)
AMCG00010890 NA coding upstream 151573 3388255 ~ 3397892 (+)
AMCG00010889 NA coding upstream 163108 3349756 ~ 3386357 (+)
AMCG00010885 NA coding upstream 266135 3277827 ~ 3283330 (+)
AMCG00010881 LOC106588497,LOC102218321,LOC107094257,LOC103154989 coding upstream 360595 3183119 ~ 3188870 (+)
AMCG00010903 NA coding downstream 120004 3670455 ~ 3677090 (+)
AMCG00010905 LOC107688368,LOC107602377,LOC107654743 coding downstream 280863 3831314 ~ 3835049 (+)
AMCG00010907 NA coding downstream 339512 3889963 ~ 3893566 (+)
AMCG00010906 LOC107592052,LOC104955441 coding downstream 365838 3916289 ~ 3946921 (+)
AMCG00010908 NA coding downstream 470610 4021061 ~ 4024002 (+)
G102959 NA non-coding upstream 86962 3459862 ~ 3462503 (+)
G102945 NA non-coding upstream 91808 3434919 ~ 3457657 (+)
G102944 NA non-coding upstream 116318 3432815 ~ 3433147 (+)
G102859 NA non-coding upstream 419201 3093934 ~ 3130264 (+)
G102860 NA non-coding upstream 445823 3099921 ~ 3103642 (+)
G103035 NA non-coding downstream 42217 3592668 ~ 3593407 (+)
G103137 pou3f1,LOC107700687,LOC107716828,LOC107755232,LOC107597138 non-coding downstream 737572 4288023 ~ 4290680 (+)
G103150 NA non-coding downstream 887426 4437877 ~ 4438136 (+)
G103152 NA non-coding downstream 985886 4536337 ~ 4619656 (+)
G103258 NA non-coding downstream 1583776 5134227 ~ 5140721 (+)
G102947 NA other upstream 105931 3436618 ~ 3443534 (+)
AMCG00010888 NA other upstream 121036 3421082 ~ 3428429 (+)
G102921 NA other upstream 150959 3331584 ~ 3398506 (+)
AMCG00010886 NA other upstream 211049 3331719 ~ 3338416 (+)
AMCG00010884 NA other upstream 238512 3301956 ~ 3310953 (+)
G103030 NA other downstream 26784 3577235 ~ 3580277 (+)
G103078 NA other downstream 499487 4049938 ~ 4083586 (+)
AMCG00010922 NA other downstream 1084021 4634472 ~ 4642403 (+)
AMCG00010979 NA other downstream 2836585 6387036 ~ 6395484 (+)
G103542 NA other downstream 3091532 6641983 ~ 6642628 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_017747 gpr6 coding NC_007131.7 CM002904.2 53278746 ~ 53279747 (+)
grasscarp (Ctenopharyngodon idella) CI01000029_08367350_08368348 GPR6 coding CI01000029 null 8366344 ~ 8368514 (+)