AMCG00010902


Basic Information

Item Value
gene id AMCG00010902
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 3577231 ~ 3588095 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010902
GCTGGACTTCGCGCCTGCCGGTTAACACAGCCTGTGCGCATCGCGGTGGGACGGATCGGAGACGGAGACGGAGACGGGGAGGGACGTGCGGCCGGCGGCGGCTCCTGCTCTGCGGCTGCGTTAGAGGCATGTGAGGAATGCGCTGCGGCCGCGGGCTGCGCTGGGCGCTCCTGCACGCCTGCCTGCTGCTCGGcccgctgctgctgctcctgcacATATTTGTGGGCATCCAAGTGCCAGGGGCTCGGGGCGGCTCCGAGGACCCCGGGGTCGCCTTCACCATCATCAGCATTGACAACAgccggagagagggagagccgGGCGGGTCTGACCCGGGCAGTCCGCCGGAGAGGAGAGCTTATCCCCGGGGATGGAGAACCGGCAGACCCGAGTTTGTGGAGGAGGACCCGACCCCACAGACTGACTACATCCCCCCGATATACGAGGATGAGAATGAGGTGATGACCCGACAGGGAGGAGCCAGACGGGAGATTGAGCTGCAGCCCTGGGTCGATGGACGCCCGTCTTTCACCGCTGAGGTGGAGCGTTTCATCGCCTACATCACCACCCCACAGGTGCAGTGTGGCCAGGAGTTGCGTCCGAGCAAGCAGCCGCACGTTGGGGGCCCAGGCGGCCCCTGGGCTGTGTGCCTGGAGGGCTGGTTCCTCCCCATGAAGGGATTGCATCCTTGTGTGGCCTACTCCTTCAGCATGGACCAGAAGGACAAGGATTTTGTGTCCGTGATGGCGGCCGCTGGCTGTGAGGTGCACCAGTTTGACCCGGGcagaagagacagacagaccccAGGAGAGGTGCATCAACACCAGACTTGGCTGGACTGGCGCAACCTCAGGGCTGGGCACAGTAAAGCCACACCGAGGAAACTAAGTGCCATCATGGAGATGTTGGGGCACAGGAAGGTGGAGTATGTCAATGCGGACCTGGAGAGTGCGGAGTGGAGGGTGGTGGAGGGCTGGGTTCTGGACGGCACTCTGAGGCAGATCCAGCAGCTGGTTCTCACGGTTCACCTGCAGTGGGCCGGGTTCGAGGTGGCCGGCAGCAGCCAGGAGGTGGTGCGGTTCTGGTACAGCGTGATGCGGGAGCTGCATGCCAGCGGGTATCGGCTACTGCACAGCGCCAgggggccgggccgggccgtaCTGCGCCACATGCTCGCCAACGCCAGCAGCACCTACACTCTGAGCTGGGTCAACACCAGGTGGAGCTACTGAGCTCACAGACTCCTTCTCGGGCAACTCGATCCTTTCAACTCTTCTGGAAGAGTGATGGAGCAAAACTGCGGtcatttcaaacacagaaagggaaaagaaaagactgatttactatgatgatgatggtatTGCAtatcagacctggaataaataTTGATATCACATGTTAACCTATATTTCAGATCTGTTTTGACATAATTATTTTGTCAGAAATGTGACCGCTGATGAAAACATGAAGGTTGGAAGCGAGGAAGCCATTGAGCTCATCTTTGTAGTAAGGAATTGACTTATTTCGTCCAGCTGCTGTTCCGCTGAAAAATGTTGCGCCTTTTTATCTCCTGATAATCCCAAAGACcgatgggaaaataaatgtttgttccAAATACACAATCTCTTTTccatacctttttttttcttgatagATGTGCAAATCCTTTTCCAAATTTTGGAAGAAAGAATTTGCCATTCCAACTCATTTATTTGACAGTTATTAAGGATCTGAAATGAATACTCTGAAATgcccaaaatgtttttaatccatACTTATTCCAGGCCTGAATGTTAAATTGTTACTGTTGTACATGTTGgcagaaaataacaattacaatctTATTTTTATCAATTCACAAGCCATGAATATACACACAAAGCACCTGGTTACGTCTGTTTATATTGCGTAacatttaagacatttaaacCGCAAGCTTCAGCATAGCACAAACAAAACCTACTTGCATTTCCTATCCATGCTACAAACACTGCGCGCATCTCCTATAACCAGCTCTGATATTCCTGATGACAATTTACAATGAAATGTCCTTACTGTTTATTTCACTGGTGCCTTTTTGTGGGAACACCACTAGAAAACCAGGGCCCTGAGGCCGATATAGGAACCAATACCAGTATAGCACAGAAAAATAAGTCCTCCTTTGTTTACACTTATGAGCACTACATTGCCATATTGTGATACTTCAGGGTCATAGTATAATTTCAGAGGTAATATATGCCCTCTAGTGGAATTGAATATATTTACAGACAGTTGAAAATTTGGCACAACCAGTGTGTTATTGTTTGATGAATCAATGATATTATAGATTGCTGTAGCACACCTTAGGACAGGAGTGCACTGGAAGCCGTGGTCTCTGACTCTCCCTGAAATGGTCtgctgtgtattgtgtgtacTGGAAATTAAAAGAGAGACTTTGTACCAGAAACCCTTGTAAGTCAGAAGGGACTATAGCAGATGTCCCAGGTGAGGAACACTGTCTACAAACGCACTAATGAGGAACAGGAGCAGGAGGTTGTGAGCATGAATCCCTAGGTAAGATAGACACTCCCATCATTAGAAAGCCTGTATGATACGGTGATTAATTTGTCTGTCGAGATGCACTATAATGGAAGTGTTACTTTTGCtttgtctatttgttttttgttgtcattgttatattttgtatactaTTCTGCTGTCCTCTGTCTTTGTTCAAATGAATAAAGTTCATTCAAAGAAAGCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010902 True 2746 mRNA 0.50 6 3577231 3588095

Neighbor

gene id symbol gene type direction distance location
AMCG00010899 NA coding downstream 52654 3514642 ~ 3524577 (-)
AMCG00010898 fam76b coding downstream 69236 3499002 ~ 3507995 (-)
AMCG00010900 NA coding downstream 81393 3485541 ~ 3495838 (-)
AMCG00010892 NA coding downstream 93608 3474632 ~ 3483623 (-)
AMCG00010894 NA coding downstream 113488 3453923 ~ 3463743 (-)
AMCG00010904 NA coding upstream 4561 3592656 ~ 3611545 (-)
AMCG00010909 NA coding upstream 427503 4015598 ~ 4020921 (-)
AMCG00010910 NA coding upstream 440707 4028802 ~ 4058729 (-)
AMCG00010914 dnali1,LOC107733506,LOC107587750 coding upstream 566936 4155031 ~ 4167037 (-)
AMCG00010917 pou3f1,LOC103364690 coding upstream 701961 4290056 ~ 4291183 (-)
G103006 NA non-coding downstream 152462 3420888 ~ 3424769 (-)
G102920 NA non-coding downstream 307462 3268542 ~ 3269769 (-)
G102890 NA non-coding downstream 415719 3161097 ~ 3161512 (-)
G102889 NA non-coding downstream 416334 3160583 ~ 3160897 (-)
G102888 NA non-coding downstream 417195 3159837 ~ 3160036 (-)
G103050 LOC103376870 non-coding upstream 196162 3784257 ~ 3784631 (-)
G103087 NA non-coding upstream 550525 4138620 ~ 4139637 (-)
G103094 NA non-coding upstream 562404 4150499 ~ 4150917 (-)
G103095 NA non-coding upstream 564423 4152518 ~ 4152748 (-)
G103149 NA non-coding upstream 837259 4425354 ~ 4425572 (-)
AMCG00010901 NA other downstream 2416 3553986 ~ 3574815 (-)
G102990 NA other downstream 158055 3320813 ~ 3419176 (-)
AMCG00010895 NA other downstream 249672 3321376 ~ 3327559 (-)
G102902 LOC104921322 other downstream 394612 3179970 ~ 3182619 (-)
G102762 NA other downstream 799208 2739816 ~ 2778023 (-)
G103112 NA other upstream 581698 4169793 ~ 4185974 (-)
AMCG00010925 srsf10,LOC108426370,LOC101486875 other upstream 1054557 4642652 ~ 4650406 (-)
AMCG00010937 NA other upstream 1527620 5115715 ~ 5129141 (-)
AMCG00010939 NA other upstream 1545958 5134053 ~ 5140509 (-)
AMCG00010946 NA other upstream 1696235 5284330 ~ 5325424 (-)

Expression


Co-expression Network